Literature DB >> 22003326

Changes in gene expression with sleep.

Matthew S Thimgan1, Stephen P Duntley, Paul J Shaw.   

Abstract

There is general agreement within the sleep community and among public health officials of the need for an accessible biomarker of sleepiness. As the foregoing discussions emphasize, however, it may be more difficult to reach consensus on how to define such a biomarker than to identify candidate molecules that can be then evaluated to determine if they might be useful to solve a variety of real-world problems related to insufficient sleep. With that in mind, a goal of our laboratories has been to develop a rational strategy to expedite the identification of candidate biomarkers. 1 We began with the assumption that since both the genetic and environmental context of a gene can influence its behavior, an effective test of sleep loss will likely be composed of a panel of multiple biomarkers. That is, we believe that it is premature to exclude a candidate analyte simply because it might also be modulated in response to other conditions (e.g., illness, metabolism, sympathetic tone, etc.). Our next assumption was that an easily accessible biomarker would be more useful in real-world settings. Thus, we have focused on saliva, as opposed to urine or blood, as a rich source of biological analytes that can be mined to optimize the chances of bringing a biomarker out into the field. Finally, we recognize that conducting validation studies in humans can be expensive and time consuming. Thus, we have exploited genetic and pharmacological tools in the model organism Drosophila melanogaster to more fully characterize the behavior of the most exciting candidate biomarkers.

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Year:  2011        PMID: 22003326      PMCID: PMC3190414          DOI: 10.5664/JCSM.1352

Source DB:  PubMed          Journal:  J Clin Sleep Med        ISSN: 1550-9389            Impact factor:   4.062


  14 in total

1.  Rest in Drosophila is a sleep-like state.

Authors:  J C Hendricks; S M Finn; K A Panckeri; J Chavkin; J A Williams; A Sehgal; A I Pack
Journal:  Neuron       Date:  2000-01       Impact factor: 17.173

2.  Functional ADA polymorphism increases sleep depth and reduces vigilant attention in humans.

Authors:  Valérie Bachmann; Federica Klaus; Sereina Bodenmann; Nikolaus Schäfer; Peter Brugger; Susanne Huber; Wolfgang Berger; Hans-Peter Landolt
Journal:  Cereb Cortex       Date:  2011-07-06       Impact factor: 5.357

3.  Dopaminergic modulation of arousal in Drosophila.

Authors:  Rozi Andretic; Bruno van Swinderen; Ralph J Greenspan
Journal:  Curr Biol       Date:  2005-07-12       Impact factor: 10.834

4.  Correlates of sleep and waking in Drosophila melanogaster.

Authors:  P J Shaw; C Cirelli; R J Greenspan; G Tononi
Journal:  Science       Date:  2000-03-10       Impact factor: 47.728

5.  Stress response genes protect against lethal effects of sleep deprivation in Drosophila.

Authors:  Paul J Shaw; Giulio Tononi; Ralph J Greenspan; Donald F Robinson
Journal:  Nature       Date:  2002-05-16       Impact factor: 49.962

6.  Identification of a biomarker for sleep drive in flies and humans.

Authors:  Laurent Seugnet; Jaime Boero; Laura Gottschalk; Stephen P Duntley; Paul J Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-13       Impact factor: 11.205

7.  Effect of psychological stress on the salivary cortisol and amylase levels in healthy young adults.

Authors:  Noriyasu Takai; Masaki Yamaguchi; Toshiaki Aragaki; Kenji Eto; Kenji Uchihashi; Yasuo Nishikawa
Journal:  Arch Oral Biol       Date:  2004-12       Impact factor: 2.633

8.  Are the structural changes in adult Drosophila mushroom bodies memory traces? Studies on biochemical learning mutants.

Authors:  A Balling; G M Technau; M Heisenberg
Journal:  J Neurogenet       Date:  1987-04       Impact factor: 1.250

9.  Sleep homeostasis in Drosophila melanogaster.

Authors:  Reto Huber; Sean L Hill; Carie Holladay; Melissa Biesiadecki; Giulio Tononi; Chiara Cirelli
Journal:  Sleep       Date:  2004-06-15       Impact factor: 5.849

10.  Chronic stress, salivary cortisol, and alpha-amylase in children with asthma and healthy children.

Authors:  Jutta M Wolf; Erin Nicholls; Edith Chen
Journal:  Biol Psychol       Date:  2007-12-23       Impact factor: 3.251

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  5 in total

1.  Foraging alters resilience/vulnerability to sleep disruption and starvation in Drosophila.

Authors:  Jeffrey Donlea; Averi Leahy; Matthew S Thimgan; Yasuko Suzuki; Bryon N Hughson; Marla B Sokolowski; Paul J Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

2.  Cytochrome P450-dependent metabolism of caffeine in Drosophila melanogaster.

Authors:  Alexandra Coelho; Stephane Fraichard; Gaëlle Le Goff; Philippe Faure; Yves Artur; Jean-François Ferveur; Jean-Marie Heydel
Journal:  PLoS One       Date:  2015-02-11       Impact factor: 3.240

3.  Excessive daytime sleepiness is associated with changes in salivary inflammatory genes transcripts.

Authors:  Matthew S Thimgan; Cristina Toedebusch; Jennifer McLeland; Stephen P Duntley; Paul J Shaw
Journal:  Mediators Inflamm       Date:  2015-03-22       Impact factor: 4.711

4.  Sleep increases chromosome dynamics to enable reduction of accumulating DNA damage in single neurons.

Authors:  D Zada; I Bronshtein; T Lerer-Goldshtein; Y Garini; L Appelbaum
Journal:  Nat Commun       Date:  2019-03-05       Impact factor: 14.919

5.  Cross-translational studies in human and Drosophila identify markers of sleep loss.

Authors:  Matthew S Thimgan; Laura Gottschalk; Cristina Toedebusch; Jennifer McLeland; Allan Rechtschaffen; Marcia Gilliland-Roberts; Stephen P Duntley; Paul J Shaw
Journal:  PLoS One       Date:  2013-04-24       Impact factor: 3.240

  5 in total

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