Literature DB >> 22003179

Isolation of 16 polymorphic microsatellite markers from an endangered and endemic species, Podocarpus nakaii (Podocarpaceae).

Yu-Chung Chiang1, Huei-Chuan Shih, Li-Wan Chang, Wan-Rung Li, Huan-Yu Lin, Li-Ping Ju.   

Abstract

PREMISE OF THE STUDY: Sixteen polymorphic microsatellite markers were isolated and characterized from the endangered evergreen tree Podocarpus nakaii to evaluate the population structure for conservation efforts. METHODS AND
RESULTS: Based on a modified amplified fragment length polymorphism and magnetic bead enrichment method, 16 polymorphic primer sets were developed for this endangered insular species. Allele numbers ranged from five to seven, with an observed heterozygosity ranging from 0.29 to 0.88. Most primers were able to amplify DNA from the endemic P. fasciculus and the widely distributed P. macrophyllus var. macrophyllus, P. macrophyllus var. maki, and P. costalis.
CONCLUSIONS: The results reported here indicate the usefulness of codominant markers for future studies of the population genetics of P. nakaii. In addition, the markers are useful for further phytogeographic and speciation studies in P. fasciculus, P. macrophyllus var. macrophyllus, and P. macrophyllus var. maki, which are closely related species.

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Year:  2011        PMID: 22003179     DOI: 10.3732/ajb.1100229

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  3 in total

1.  Characterization of 42 microsatellite markers from poison ivy, Toxicodendron radicans (Anacardiaceae).

Authors:  Tsai-Wen Hsu; Huei-Chuan Shih; Chia-Chi Kuo; Tzen-Yuh Chiang; Yu-Chung Chiang
Journal:  Int J Mol Sci       Date:  2013-10-14       Impact factor: 5.923

2.  Development and characterization of 16 polymorphic microsatellite markers from Taiwan cow-tail fir, Keteleeria davidiana var. formosana (Pinaceae) and cross-species amplification in other Keteleeria taxa.

Authors:  Chin-Shang Ho; Huei-Chuan Shih; Ho-Yih Liu; Shau-Ting Chiu; Mei-Hui Chen; Li-Ping Ju; Ya-Zhu Ko; Yu-Shen Shih; Chaur-Tzuhn Chen; Tsai-Wen Hsu; Yu-Chung Chiang
Journal:  BMC Res Notes       Date:  2014-04-23

3.  Characterization of 39 microsatellite markers from Nuphar shimadai (Nymphaeaceae) and cross-amplification in two related taxa.

Authors:  Hsueh-Yu Lu; Huei-Chuan Shih; Li-Ping Ju; Chao-Ching Hwang; Yu-Chung Chiang
Journal:  Appl Plant Sci       Date:  2018-10-19       Impact factor: 1.936

  3 in total

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