Literature DB >> 21997490

Hammering out HIV-1 incidence with Hamming distance.

Ossama Allam, Suzanne Samarani, Ali Ahmad.   

Abstract

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Year:  2011        PMID： 21997490     DOI： 10.1097/QAD.0b013e32834bac66

Source DB:  PubMed          Journal:  AIDS        ISSN： 0269-9370            Impact factor:   4.177


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  8 in total

1.  Developing high-throughput HIV incidence assay with pyrosequencing platform.

Authors:  Sung Yong Park; Nolan Goeken; Hyo Jin Lee; Robert Bolan; Michael P Dubé; Ha Youn Lee
Journal:  J Virol       Date:  2013-12-26       Impact factor: 5.103

Review 2.  Identifying Recent HIV Infections: From Serological Assays to Genomics.

Authors:  Sikhulile Moyo; Eduan Wilkinson; Vladimir Novitsky; Alain Vandormael; Simani Gaseitsiwe; Max Essex; Susan Engelbrecht; Tulio de Oliveira
Journal:  Viruses       Date:  2015-10-23       Impact factor: 5.048

3.  High-accuracy identification of incident HIV-1 infections using a sequence clustering based diversity measure.

Authors:  Xia-Yu Xia; Meng Ge; Jenny H Hsi; Xiang He; Yu-Hua Ruan; Zhi-Xin Wang; Yi-Ming Shao; Xian-Ming Pan
Journal:  PLoS One       Date:  2014-06-12       Impact factor: 3.240

4.  Analysis of Viral Diversity in Relation to the Recency of HIV-1C Infection in Botswana.

Authors:  Sikhulile Moyo; Alain Vandormael; Eduan Wilkinson; Susan Engelbrecht; Simani Gaseitsiwe; Kenanao P Kotokwe; Rosemary Musonda; Frank Tanser; Max Essex; Vladimir Novitsky; Tulio de Oliveira
Journal:  PLoS One       Date:  2016-08-23       Impact factor: 3.240

5.  HIV-1 envelope sequence-based diversity measures for identifying recent infections.

Authors:  Alexis Kafando; Eric Fournier; Bouchra Serhir; Christine Martineau; Florence Doualla-Bell; Mohamed Ndongo Sangaré; Mohamed Sylla; Annie Chamberland; Mohamed El-Far; Hugues Charest; Cécile L Tremblay
Journal:  PLoS One       Date:  2017-12-28       Impact factor: 3.240

6.  Molecular dating and viral load growth rates suggested that the eclipse phase lasted about a week in HIV-1 infected adults in East Africa and Thailand.

Authors:  Morgane Rolland; Sodsai Tovanabutra; Bethany Dearlove; Yifan Li; Christopher L Owen; Eric Lewitus; Eric Sanders-Buell; Meera Bose; AnneMarie O'Sullivan; Raabya Rossenkhan; Jan Phillipus Lourens Labuschagne; Paul T Edlefsen; Daniel B Reeves; Gustavo Kijak; Shana Miller; Kultida Poltavee; Jenica Lee; Lydia Bonar; Elizabeth Harbolick; Bahar Ahani; Phuc Pham; Hannah Kibuuka; Lucas Maganga; Sorachai Nitayaphan; Fred K Sawe; Leigh Anne Eller; Robert Gramzinski; Jerome H Kim; Nelson L Michael; Merlin L Robb
Journal:  PLoS Pathog       Date:  2020-02-06       Impact factor: 6.823

7.  Incorporating Within-Host Diversity in Phylogenetic Analyses for Detecting Clusters of New HIV Diagnoses.

Authors:  August Guang; Mark Howison; Lauren Ledingham; Matthew D'Antuono; Philip A Chan; Charles Lawrence; Casey W Dunn; Rami Kantor
Journal:  Front Microbiol       Date:  2022-02-17       Impact factor: 6.064

8.  Estimating time of HIV-1 infection from next-generation sequence diversity.

Authors:  Vadim Puller; Richard Neher; Jan Albert
Journal:  PLoS Comput Biol       Date:  2017-10-02       Impact factor: 4.475
  8 in total

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