Literature DB >> 21997131

Detecting effective connectivity in networks of coupled neuronal oscillators.

Erin R Boykin1, Pramod P Khargonekar, Paul R Carney, William O Ogle, Sachin S Talathi.   

Abstract

The application of data-driven time series analysis techniques such as Granger causality, partial directed coherence and phase dynamics modeling to estimate effective connectivity in brain networks has recently gained significant prominence in the neuroscience community. While these techniques have been useful in determining causal interactions among different regions of brain networks, a thorough analysis of the comparative accuracy and robustness of these methods in identifying patterns of effective connectivity among brain networks is still lacking. In this paper, we systematically address this issue within the context of simple networks of coupled spiking neurons. Specifically, we develop a method to assess the ability of various effective connectivity measures to accurately determine the true effective connectivity of a given neuronal network. Our method is based on decision tree classifiers which are trained using several time series features that can be observed solely from experimentally recorded data. We show that the classifiers constructed in this work provide a general framework for determining whether a particular effective connectivity measure is likely to produce incorrect results when applied to a dataset.

Mesh:

Year:  2011        PMID: 21997131     DOI: 10.1007/s10827-011-0367-3

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  39 in total

1.  Dynamics of spiking neurons with electrical coupling.

Authors:  C C Chow; N Kopell
Journal:  Neural Comput       Date:  2000-07       Impact factor: 2.026

2.  Role of chemical synapses in coupled neurons with noise.

Authors:  Pablo Balenzuela; Jordi García-Ojalvo
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-08-01

3.  Detection of weak directional coupling: phase-dynamics approach versus state-space approach.

Authors:  Dmitry A Smirnov; Ralph G Andrzejak
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-03-15

4.  Frequency decomposition of conditional Granger causality and application to multivariate neural field potential data.

Authors:  Yonghong Chen; Steven L Bressler; Mingzhou Ding
Journal:  J Neurosci Methods       Date:  2005-08-15       Impact factor: 2.390

5.  Frequency domain connectivity identification: an application of partial directed coherence in fMRI.

Authors:  João R Sato; Daniel Y Takahashi; Silvia M Arcuri; Koichi Sameshima; Pedro A Morettin; Luiz A Baccalá
Journal:  Hum Brain Mapp       Date:  2009-02       Impact factor: 5.038

6.  Detection of couplings in ensembles of stochastic oscillators.

Authors:  Dmitry A Smirnov; Boris P Bezruchko
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-04-06

7.  Gamma oscillation by synaptic inhibition in a hippocampal interneuronal network model.

Authors:  X J Wang; G Buzsáki
Journal:  J Neurosci       Date:  1996-10-15       Impact factor: 6.167

8.  Two distinct and activity-dependent mechanisms contribute to autoreceptor-mediated inhibition of GABAergic afferents to hilar mossy cells.

Authors:  Casie Lindsly; Charles J Frazier
Journal:  J Physiol       Date:  2010-06-14       Impact factor: 5.182

9.  Rapid synchronization through fast threshold modulation.

Authors:  D Somers; N Kopell
Journal:  Biol Cybern       Date:  1993       Impact factor: 2.086

10.  Dynamic Granger causality based on Kalman filter for evaluation of functional network connectivity in fMRI data.

Authors:  Martin Havlicek; Jiri Jan; Milan Brazdil; Vince D Calhoun
Journal:  Neuroimage       Date:  2010-06-01       Impact factor: 6.556

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  1 in total

1.  Conflict and adaptation signals in the anterior cingulate cortex and ventral tegmental area.

Authors:  Thomas W Elston; Shivam Kalhan; David K Bilkey
Journal:  Sci Rep       Date:  2018-08-06       Impact factor: 4.379

  1 in total

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