Literature DB >> 21994934

Complete genome sequence of the industrial strain Ketogulonicigenium vulgare WSH-001.

Liming Liu1, Yang Li, Jing Zhang, Zhemin Zhou, Jie Liu, Xiaomin Li, Jingwen Zhou, Guocheng Du, Lei Wang, Jian Chen.   

Abstract

Ketogulonicigenium vulgare is an industrial organism commonly used in the vitamin C industry. Here, we report the finished, annotated, and compared 3.28-Mbp high-quality genome sequence of Ketogulonicigenium vulgare WSH-001, a 2-keto-l-gulonic acid-producing industrial strain stocked in our laboratory.

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Year:  2011        PMID: 21994934      PMCID: PMC3194925          DOI: 10.1128/JB.06007-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  9 in total

1.  ZCURVE: a new system for recognizing protein-coding genes in bacterial and archaeal genomes.

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Journal:  Nucleic Acids Res       Date:  2003-03-15       Impact factor: 16.971

2.  Complete genome sequence of the bacterium Ketogulonicigenium vulgare Y25.

Authors:  Xiang-hua Xiong; Shuang Han; Jian-hua Wang; Ze-hui Jiang; Wei Chen; Ning Jia; Hong-li Wei; Hong Cheng; Yan-xin Yang; Bin Zhu; Song You; Jian-yong He; Wei Hou; Meng-xia Chen; Chun-jie Yu; Ying-hui Jiao; Wei-cai Zhang
Journal:  J Bacteriol       Date:  2010-10-29       Impact factor: 3.490

3.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

4.  Studies on kinetic model of vitamin C two-step fermentation process.

Authors:  D Wei; W Yuan; G Yin; Z Yuan; M Chen
Journal:  Chin J Biotechnol       Date:  1992

5.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

6.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

7.  Development of chemically defined media supporting high cell density growth of Ketogulonicigenium vulgare and Bacillus megaterium.

Authors:  Jing Zhang; Jingwen Zhou; Jie Liu; Kejie Chen; Liming Liu; Jian Chen
Journal:  Bioresour Technol       Date:  2010-10-31       Impact factor: 9.642

8.  Pyrroloquinoline quinone-dependent dehydrogenases from Ketogulonicigenium vulgare catalyze the direct conversion of L-sorbosone to L-ascorbic acid.

Authors:  Taro Miyazaki; Teruhide Sugisawa; Tatsuo Hoshino
Journal:  Appl Environ Microbiol       Date:  2006-02       Impact factor: 4.792

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

  9 in total
  7 in total

1.  Reconstruction of amino acid biosynthetic pathways increases the productivity of 2-keto-L-gulonic acid in Ketogulonicigenium vulgare-Bacillus endophyticus consortium via genes screening.

Authors:  Cai-Hui Pan; En-Xu Wang; Nan Jia; Xiu-Tao Dong; Yu Liu; Ming-Zhu Ding; Ying-Jin Yuan
Journal:  J Ind Microbiol Biotechnol       Date:  2017-03-10       Impact factor: 3.346

2.  L-sorbose is not only a substrate for 2-keto-L-gulonic acid production in the artificial microbial ecosystem of two strains mixed fermentation.

Authors:  Weichao Yang; Chengbin Liu; Hui Xu
Journal:  J Ind Microbiol Biotechnol       Date:  2015-04-10       Impact factor: 3.346

3.  A plate method for rapid screening of Ketogulonicigenium vulgare mutants for enhanced 2-keto-l-gulonic acid production.

Authors:  Weichao Yang; Litao Han; Mandlaa Mandlaa; Haihong Zhang; Zhongze Zhang; Hui Xu
Journal:  Braz J Microbiol       Date:  2017-02-21       Impact factor: 2.476

4.  Enhanced 2-keto-L-gulonic acid production by applying L-sorbose-tolerant helper strain in the co-culture system.

Authors:  Ziyu Sun; Ruigang Wang; Xiaodong Han; Hui Xu; Weichao Yang
Journal:  AMB Express       Date:  2018-02-28       Impact factor: 3.298

5.  Reconstruction and analysis of carbon metabolic pathway of Ketogulonicigenium vulgare SPU B805 by genome and transcriptome.

Authors:  Cai-Yun Wang; Ye Li; Zi-Wei Gao; Li-Cheng Liu; Ying-Cai Wu; Meng-Yue Zhang; Tian-Yuan Zhang; Yi-Xuan Zhang
Journal:  Sci Rep       Date:  2018-12-13       Impact factor: 4.379

6.  Recognition of Protein-coding Genes Based on Z-curve Algorithms.

Authors:  Feng -Biao Guo; Yan Lin; Ling -Ling Chen
Journal:  Curr Genomics       Date:  2014-04       Impact factor: 2.236

7.  Establishing an innovative carbohydrate metabolic pathway for efficient production of 2-keto-L-gulonic acid in Ketogulonicigenium robustum initiated by intronic promoters.

Authors:  Cai-Yun Wang; Ye Li; Zi-Wei Gao; Li-Cheng Liu; Meng-Yue Zhang; Tian-Yuan Zhang; Chun-Fu Wu; Yi-Xuan Zhang
Journal:  Microb Cell Fact       Date:  2018-05-19       Impact factor: 5.328

  7 in total

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