Literature DB >> 21994928

Genome sequence of Mycoplasma capricolum subsp. capripneumoniae strain M1601.

Yuefeng Chu1, Pengchen Gao, Ping Zhao, Ying He, Nancy Liao, Shaun Jackman, Yongjun Zhao, Inanc Birol, Xiaobo Duan, Zhongxin Lu.   

Abstract

Mycoplasma capricolum subsp. capripneumoniae is the causative agent of contagious caprine pleuropneumonia, a devastating disease of goats listed by the World Organization for Animal Health. Here we report the first complete genome sequence of this organism (strain M1601, a clinically isolated strain from China).

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Year:  2011        PMID： 21994928      PMCID： PMC3194924          DOI： 10.1128/JB.05980-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences.

Authors:  Dean Laslett; Bjorn Canback
Journal:  Nucleic Acids Res       Date:  2004-01-02       Impact factor: 16.971

2.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

3.  ABySS: a parallel assembler for short read sequence data.

Authors:  Jared T Simpson; Kim Wong; Shaun D Jackman; Jacqueline E Schein; Steven J M Jones; Inanç Birol
Journal:  Genome Res       Date:  2009-02-27       Impact factor: 9.043

4.  Genome sequence of Mycoplasma ovipneumoniae strain SC01.

Authors:  Falong Yang; Cheng Tang; Yong Wang; Huanrong Zhang; Hua Yue
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

5.  Multi-locus sequence analysis of Mycoplasma capricolum subsp. capripneumoniae for the molecular epidemiology of contagious caprine pleuropneumonia.

Authors:  Lucía Manso-Silván; Virginie Dupuy; Yuefeng Chu; François Thiaucourt
Journal:  Vet Res       Date:  2011-07-14       Impact factor: 3.683

6.  The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.

Authors:  Peter Schattner; Angela N Brooks; Todd M Lowe
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

7.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  7 in total
  10 in total

1.  Highly dynamic genomic loci drive the synthesis of two types of capsular or secreted polysaccharides within the Mycoplasma mycoides cluster.

Authors:  Clothilde Bertin; Corinne Pau-Roblot; Josiane Courtois; Lucía Manso-Silván; Florence Tardy; François Poumarat; Christine Citti; Pascal Sirand-Pugnet; Patrice Gaurivaud; François Thiaucourt
Journal:  Appl Environ Microbiol       Date:  2014-11-14       Impact factor: 4.792

2.  A large-scale genomic approach affords unprecedented resolution for the molecular epidemiology and evolutionary history of contagious caprine pleuropneumonia.

Authors:  Virginie Dupuy; Axel Verdier; François Thiaucourt; Lucía Manso-Silván
Journal:  Vet Res       Date:  2015-07-06       Impact factor: 3.683

3.  An international collaborative study to determine the prevalence of contagious caprine pleuropneumonia by monoclonal antibody-based cELISA.

Authors:  Armelle Peyraud; François Poumarat; Florence Tardy; Lucía Manso-Silván; Karomatullo Hamroev; Tillo Tilloev; Mullojon Amirbekov; Karim Tounkara; Charles Bodjo; Hezron Wesonga; Isabel Gacheri Nkando; Shiferaw Jenberie; Martha Yami; Eric Cardinale; Deodass Meenowa; Mahmad Reshad Jaumally; Tahir Yaqub; Muhammad Zubair Shabbir; Nadia Mukhtar; Mohibullah Halimi; Ghulam Mohammad Ziay; Willy Schauwers; Hafizullah Noori; Ali Madad Rajabi; Stéphane Ostrowski; François Thiaucourt
Journal:  BMC Vet Res       Date:  2014-02-24       Impact factor: 2.741

4.  Complete Genome Sequences of Virulent Mycoplasma capricolum subsp. capripneumoniae Strains F38 and ILRI181.

Authors:  Laurent Falquet; Anne Liljander; Elise Schieck; Ilona Gluecks; Joachim Frey; Joerg Jores
Journal:  Genome Announc       Date:  2014-10-16

5.  Complete Genome Sequence of Mycoplasma capricolum subsp. capripneumoniae Strain 9231-Abomsa.

Authors:  Virginie Dupuy; François Thiaucourt
Journal:  Genome Announc       Date:  2014-10-16

6.  Genome-Wide Analysis of the First Sequenced Mycoplasma capricolum subsp. capripneumoniae Strain M1601.

Authors:  Shengli Chen; Huafang Hao; Ping Zhao; François Thiaucourt; Ying He; Pengcheng Gao; Han Guo; Wenheng Ji; Zhanhui Wang; Zhongxin Lu; Yuefeng Chu; Yongsheng Liu
Journal:  G3 (Bethesda)       Date:  2017-09-07       Impact factor: 3.154

Review 7.  Novel Candidates for Vaccine Development Against Mycoplasma Capricolum Subspecies Capripneumoniae (Mccp)-Current Knowledge and Future Prospects.

Authors:  Mohd Iqbal Yatoo; Oveas Raffiq Parray; Riyaz Ahmed Bhat; Qurat Un Nazir; Abrar Ul Haq; Hamid Ullah Malik; Mujeeb Ur Rehman Fazilli; Arumugam Gopalakrishnan; Shah Tauseef Bashir; Ruchi Tiwari; Sandip Kumar Khurana; Wanpen Chaicumpa; Kuldeep Dhama
Journal:  Vaccines (Basel)       Date:  2019-07-23

Review 8.  Contagious caprine pleuropneumonia - a comprehensive review.

Authors:  Mohd Iqbal Yatoo; Oveas Raffiq Parray; Shah Tauseef Bashir; Riyaz Ahmed Bhat; Arumugam Gopalakrishnan; Kumaragurubaran Karthik; Kuldeep Dhama; Shoor Vir Singh
Journal:  Vet Q       Date:  2019-12       Impact factor: 3.320

9.  Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data.

Authors:  Inanc Birol; Anthony Raymond; Shaun D Jackman; Stephen Pleasance; Robin Coope; Greg A Taylor; Macaire Man Saint Yuen; Christopher I Keeling; Dana Brand; Benjamin P Vandervalk; Heather Kirk; Pawan Pandoh; Richard A Moore; Yongjun Zhao; Andrew J Mungall; Barry Jaquish; Alvin Yanchuk; Carol Ritland; Brian Boyle; Jean Bousquet; Kermit Ritland; John Mackay; Jörg Bohlmann; Steven J M Jones
Journal:  Bioinformatics       Date:  2013-05-22       Impact factor: 6.937

10.  A novel nuclear genetic code alteration in yeasts and the evolution of codon reassignment in eukaryotes.

Authors:  Stefanie Mühlhausen; Peggy Findeisen; Uwe Plessmann; Henning Urlaub; Martin Kollmar
Journal:  Genome Res       Date:  2016-05-06       Impact factor: 9.043
  10 in total

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