Literature DB >> 21994923

Genome sequence of Escherichia coli XH140A, which produces L-threonine.

Huilin Yang1, Yuling Liao, Bin Wang, Ying Lin, Li Pan.   

Abstract

Here we report the draft annotated genome sequence of Escherichia coli XH140A, which is used to produce l-threonine in industry. The genome sequence will allow the characterization of the molecular mechanisms underlying its beneficial properties.

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Year:  2011        PMID： 21994923      PMCID： PMC3194923          DOI： 10.1128/JB.06011-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  13 in total

1.  Mutation analysis of the feedback inhibition site of aspartokinase III of Escherichia coli K-12 and its use in L-threonine production.

Authors:  Y Ogawa-Miyata; H Kojima; K Sano
Journal:  Biosci Biotechnol Biochem       Date:  2001-05       Impact factor: 2.043

2.  GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.

Authors:  J Besemer; A Lomsadze; M Borodovsky
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

3.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

4.  The COG database: a tool for genome-scale analysis of protein functions and evolution.

Authors:  R L Tatusov; M Y Galperin; D A Natale; E V Koonin
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

5.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

6.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

7.  The complete genome sequence of Escherichia coli K-12.

Authors:  F R Blattner; G Plunkett; C A Bloch; N T Perna; V Burland; M Riley; J Collado-Vides; J D Glasner; C K Rode; G F Mayhew; J Gregor; N W Davis; H A Kirkpatrick; M A Goeden; D J Rose; B Mau; Y Shao
Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

8.  Improved L-threonine production of Escherichia coli mutant by optimization of culture conditions.

Authors:  Man-Hyo Lee; Hong-Weon Lee; Jin-Ho Park; Jung-Oh Ahn; Joon-Ki Jung; Yong-Il Hwang
Journal:  J Biosci Bioeng       Date:  2006-02       Impact factor: 2.894

9.  Influence of threonine exporters on threonine production in Escherichia coli.

Authors:  D Kruse; R Krämer; L Eggeling; M Rieping; W Pfefferle; J H Tchieu; Y J Chung; M H Jr Saier; A Burkovski
Journal:  Appl Microbiol Biotechnol       Date:  2002-04-04       Impact factor: 4.813

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
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