Literature DB >> 2199449

Three-dimensional structure of thymidine phosphorylase from Escherichia coli at 2.8 A resolution.

M R Walter1, W J Cook, L B Cole, S A Short, G W Koszalka, T A Krenitsky, S E Ealick.   

Abstract

The three-dimensional structure of thymidine phosphorylase from Escherichia coli has been determined at 2.8 A resolution using multiple-isomorphous-replacement techniques. The amino acid sequence deduced from the deoA DNA sequence is also reported. Thymidine phosphorylase exists in the crystal as an S-shaped dimer in which the subunits are related by a crystallographic 2-fold axis. Each subunit is composed of a small alpha-helical domain of six helices and a large alpha/beta domain. The alpha/beta domain includes a six-stranded mixed beta-sheet and a four-stranded antiparallel beta-sheet. The active site has been identified by difference Fourier analyses of the binding of thymine and thymidine and lies in a cavity between the small and large domains. The central beta-sheet is splayed open to accommodate a putative phosphate-binding site which is probably occupied by a sulfate ion in the crystal.

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Year:  1990        PMID: 2199449     DOI: 10.2210/pdb1tpt/pdb

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  22 in total

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5.  Structural basis for non-competitive product inhibition in human thymidine phosphorylase: implications for drug design.

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6.  Structural investigation of the thymidine phosphorylase from Salmonella typhimurium in the unliganded state and its complexes with thymidine and uridine.

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Review 7.  Structural analyses reveal two distinct families of nucleoside phosphorylases.

Authors:  Matthew J Pugmire; Steven E Ealick
Journal:  Biochem J       Date:  2002-01-01       Impact factor: 3.857

8.  Characterization of the genes and proteins of a two-component system from the hyperthermophilic bacterium Thermotoga maritima.

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Review 9.  Functions of the gene products of Escherichia coli.

Authors:  M Riley
Journal:  Microbiol Rev       Date:  1993-12

10.  Structures of native human thymidine phosphorylase and in complex with 5-iodouracil.

Authors:  Eirini Mitsiki; Anastassios C Papageorgiou; Shalini Iyer; Nethaji Thiyagarajan; Steven H Prior; Darrell Sleep; Chris Finnis; K Ravi Acharya
Journal:  Biochem Biophys Res Commun       Date:  2009-06-23       Impact factor: 3.575

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