Literature DB >> 2199064

Three-dimensional structures of H-ras p21 mutants: molecular basis for their inability to function as signal switch molecules.

U Krengel1, I Schlichting, A Scherer, R Schumann, M Frech, J John, W Kabsch, E F Pai, A Wittinghofer.   

Abstract

The X-ray structures of the guanine nucleotide binding domains (amino acids 1-166) of five mutants of the H-ras oncogene product p21 were determined. The mutations described are Gly-12----Arg, Gly-12----Val, Gln-61----His, Gln-61----Leu, which are all oncogenic, and the effector region mutant Asp-38----Glu. The resolutions of the crystal structures range from 2.0 to 2.6 A. Cellular and mutant p21 proteins are almost identical, and the only significant differences are seen in loop L4 and in the vicinity of the gamma-phosphate. For the Gly-12 mutants the larger side chains interfere with GTP binding and/or hydrolysis. Gln-61 in cellular p21 adopts a conformation where it is able to catalyze GTP hydrolysis. This conformation has not been found for the mutants of Gln-61. Furthermore, Leu-61 cannot activate the nucleophilic water because of the chemical nature of its side chain. The D38E mutation preserves its ability to bind GAP.

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Year:  1990        PMID: 2199064     DOI: 10.1016/0092-8674(90)90018-a

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  109 in total

1.  Characterization of the hinges of the effector loop in the reaction pathway of the activation of ras-proteins. Kinetics of binding of beryllium trifluoride to V29G and I36G mutants of Ha-ras-p21.

Authors:  S Kuppens; J F Díaz; Y Engelborghs
Journal:  Protein Sci       Date:  1999-09       Impact factor: 6.725

2.  Alternative splicing of the human Rab6A gene generates two close but functionally different isoforms.

Authors:  A Echard; F J Opdam; H J de Leeuw; F Jollivet; P Savelkoul; W Hendriks; J Voorberg; B Goud; J A Fransen
Journal:  Mol Biol Cell       Date:  2000-11       Impact factor: 4.138

3.  Molecular dynamics simulations of Gly-12-->Val mutant of p21(ras): dynamic inhibition mechanism.

Authors:  N Futatsugi; M Tsuda
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

4.  Interaction of GTPase-activating protein with p21ras, measured using a continuous assay for inorganic phosphate release.

Authors:  M R Webb; J L Hunter
Journal:  Biochem J       Date:  1992-10-15       Impact factor: 3.857

5.  Single-molecule imaging analysis of Ras activation in living cells.

Authors:  Hideji Murakoshi; Ryota Iino; Takeshi Kobayashi; Takahiro Fujiwara; Chika Ohshima; Akihiko Yoshimura; Akihiro Kusumi
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-29       Impact factor: 11.205

6.  Comparison of molecular dynamics averaged structures for complexes of normal and oncogenic ras-p21 with SOS nucleotide exchange protein, containing computed conformations for three crystallographically undefined domains, suggests a potential role of these domains in ras signaling.

Authors:  Thomas Duncan; James M Chen; Fred K Friedman; Mark Hyde; Lyndon Chie; Matthew R Pincus
Journal:  Protein J       Date:  2004-04       Impact factor: 2.371

7.  GTPase domains of ras p21 oncogene protein and elongation factor Tu: analysis of three-dimensional structures, sequence families, and functional sites.

Authors:  A Valencia; M Kjeldgaard; E F Pai; C Sander
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-15       Impact factor: 11.205

8.  Biological and structural characterization of a Ras transforming mutation at the phenylalanine-156 residue, which is conserved in all members of the Ras superfamily.

Authors:  L A Quilliam; S Zhong; K M Rabun; J W Carpenter; T L South; C J Der; S Campbell-Burk
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-28       Impact factor: 11.205

9.  Quantitative exploration of the molecular origin of the activation of GTPase.

Authors:  Ram Prasad B; Nikolay V Plotnikov; Jeronimo Lameira; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-26       Impact factor: 11.205

10.  The folliculin tumor suppressor is a GAP for the RagC/D GTPases that signal amino acid levels to mTORC1.

Authors:  Liron Bar-Peled; Lynne Chantranupong; Zhi-Yang Tsun; Roberto Zoncu; Tim Wang; Choah Kim; Eric Spooner; David M Sabatini
Journal:  Mol Cell       Date:  2013-10-03       Impact factor: 17.970

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