Literature DB >> 21988693

LUEGO: a cost and time saving gel shift procedure.

Nicolas Jullien1, Jean-Paul Herman.   

Abstract

We developed a new approach to prepare DNA probes for electrophoretic mobility gel shift assays that presents a number of advantages compared with the classical approach. The method relies on two complementary oligonucleotides containing the desired transcription factor binding sequence, one of them being extended at its 3' end with a universal tail that complements a third, short oligonucleotide labeled with a fluorophore or any other label. The use of this third "universal" oligonucleotide allows labeling many different probes with minimal time, effort and cost. We show that probes prepared this way are as effective and reliable as probes prepared by conventional methods. We refer to this short oligonucleotide as LUEGO for labeled universal electrophoretic gel shift oligonucleotide.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21988693     DOI: 10.2144/000113751

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  15 in total

1.  The Prozone Effect Accounts for the Paradoxical Function of the Cdk-Binding Protein Suc1/Cks.

Authors:  Sang Hoon Ha; Sun Young Kim; James E Ferrell
Journal:  Cell Rep       Date:  2016-02-04       Impact factor: 9.423

2.  An Optimized Protocol for Electrophoretic Mobility Shift Assay Using Infrared Fluorescent Dye-labeled Oligonucleotides.

Authors:  Yi-Wen Hsieh; Amel Alqadah; Chiou-Fen Chuang
Journal:  J Vis Exp       Date:  2016-11-29       Impact factor: 1.355

3.  Heterozygous LHX3 mutations may lead to a mild phenotype of combined pituitary hormone deficiency.

Authors:  Nicolas Jullien; Pauline Romanet; Mélanie Philippon; Marie-Hélène Quentien; Paolo Beck-Peccoz; Ignacio Bergada; Sylvie Odent; Rachel Reynaud; Anne Barlier; Alexandru Saveanu; Thierry Brue; Frederic Castinetti
Journal:  Eur J Hum Genet       Date:  2018-09-27       Impact factor: 4.246

4.  Loss-of-Function Mutations in HspR Rescue the Growth Defect of a Mycobacterium tuberculosis Proteasome Accessory Factor E (pafE) Mutant.

Authors:  Jordan B Jastrab; Marie I Samanovic; Richard Copin; Bo Shopsin; K Heran Darwin
Journal:  J Bacteriol       Date:  2017-03-14       Impact factor: 3.490

5.  Small-molecule inhibitor of the Shigella flexneri master virulence regulator VirF.

Authors:  Veerendra Koppolu; Ichie Osaka; Jeff M Skredenske; Bria Kettle; P Scott Hefty; Jiaqin Li; Susan M Egan
Journal:  Infect Immun       Date:  2013-09-03       Impact factor: 3.441

6.  Thresholds and ultrasensitivity from negative cooperativity.

Authors:  S H Ha; J E Ferrell
Journal:  Science       Date:  2016-05-12       Impact factor: 47.728

7.  Sulfate Ester Detergent Degradation in Pseudomonas aeruginosa Is Subject to both Positive and Negative Regulation.

Authors:  Gianna Panasia; Sylvia Oetermann; Alexander Steinbüchel; Bodo Philipp
Journal:  Appl Environ Microbiol       Date:  2019-11-14       Impact factor: 4.792

8.  Quantitation of nuclear factor kappa B activation in pancreatic acinar cells during rat acute pancreatitis by flow cytometry.

Authors:  Wenliang Chen; Zhuanzhen Zheng; Junfang Duan; Xiaoru Wang; Shirong Wu; Wei Wang; Lu Xu; Shuguang Han; Zhenhua Qiao
Journal:  Int J Clin Exp Med       Date:  2015-06-15

9.  The Structural Basis of Asymmetry in DNA Binding and Cleavage as Exhibited by the I-SmaMI LAGLIDADG Meganuclease.

Authors:  Betty W Shen; Abigail Lambert; Bradley C Walker; Barry L Stoddard; Brett K Kaiser
Journal:  J Mol Biol       Date:  2015-12-15       Impact factor: 5.469

Review 10.  Challenges with Methods for Detecting and Studying the Transcription Factor Nuclear Factor Kappa B (NF-κB) in the Central Nervous System.

Authors:  Marina Mostafizar; Claudia Cortes-Pérez; Wanda Snow; Jelena Djordjevic; Aida Adlimoghaddam; Benedict C Albensi
Journal:  Cells       Date:  2021-05-28       Impact factor: 6.600

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.