Literature DB >> 21985185

PAX6 3' deletion in a family with aniridia.

Anna Wawrocka1, Bartlomiej Budny, Szymon Debicki, Aleksander Jamsheer, Anna Sowinska, Maciej Robert Krawczynski.   

Abstract

BACKGROUND: Aniridia is a congenital panocular malformation defined as iris aplasia or hypoplasia. It can be either isolated or be a part of multiple ocular anomalies such as cataracts, glaucoma, corneal pannus, optic nerve hypoplasia, absence of macular reflex or ectopia lentis. In the majority of cases the disease is caused by mutation in the PAX6 gene.
MATERIAL AND METHODS: A Polish family with aniridia was screened for the presence of genomic rearrangements in PAX6, WT1 and the flanking genes by means of multiplex ligation probe amplification (MLPA). MLPA reaction was performed using the P219-B1 PAX6 commercial kit from MRC-Holland. Additionally, the coding sequence of PAX6 gene was sequenced in the proband. Array comparative genomic hybridization analysis was performed using the NimbleGen CGX-12 format.
RESULTS: MLPA examination revealed a heterozygous deletion of approximately 0.6  Mb, downstream of PAX6 gene on chromosome 11. Four genes lie in the deleted region. Bi-directional sequencing of 14 exons of the PAX6 gene did not reveal any causative alteration. Microarray analysis confirmed the deletion and determined its size which ranged from 598.87-651.76 kb.
CONCLUSIONS: A small subset of aniridia cases is caused by rearrangements of PAX6 neighboring regions, and the so-called "position effect" is considered to be the underlying pathogenic mechanism. Molecular testing of aniridia patients should include sequencing of the PAX6 gene, followed by screening for larger structural abnormalities located on chromosome 11p13. MLPA can be a useful method in molecular testing of aniridia patients.

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Year:  2011        PMID: 21985185     DOI: 10.3109/13816810.2011.615076

Source DB:  PubMed          Journal:  Ophthalmic Genet        ISSN: 1381-6810            Impact factor:   1.803


  7 in total

Review 1.  Aniridia due to a novel microdeletion affecting PAX6 regulatory enhancers: case report and review of the literature.

Authors:  Andreas Syrimis; Nayia Nicolaou; Angelos Alexandrou; Ioannis Papaevripidou; Michael Nicolaou; Eleni Loukianou; Violetta Christophidou-Anastasiadou; Stavros Malas; Carolina Sismani; George A Tanteles
Journal:  J Genet       Date:  2018-06       Impact factor: 1.166

2.  Gene expression and functional annotation of the human ciliary body epithelia.

Authors:  Sarah F Janssen; Theo G M F Gorgels; Koen Bossers; Jacoline B Ten Brink; Anke H W Essing; Martijn Nagtegaal; Peter J van der Spek; Nomdo M Jansonius; Arthur A B Bergen
Journal:  PLoS One       Date:  2012-09-18       Impact factor: 3.240

Review 3.  The genetics of aniridia - simple things become complicated.

Authors:  Anna Wawrocka; Maciej R Krawczynski
Journal:  J Appl Genet       Date:  2018-02-19       Impact factor: 3.240

4.  Improving molecular diagnosis of aniridia and WAGR syndrome using customized targeted array-based CGH.

Authors:  Fiona Blanco-Kelly; María Palomares; Elena Vallespín; Cristina Villaverde; Rubén Martín-Arenas; Camilo Vélez-Monsalve; Isabel Lorda-Sánchez; Julián Nevado; María José Trujillo-Tiebas; Pablo Lapunzina; Carmen Ayuso; Marta Corton
Journal:  PLoS One       Date:  2017-02-23       Impact factor: 3.240

5.  Phenotypic Variation in a Four-Generation Family with Aniridia Carrying a Novel PAX6 Mutation.

Authors:  Grace M Wang; Lev Prasov; Hayder Al-Hasani; Colin E R Marrs; Sahil Tolia; Laurel Wiinikka-Buesser; Julia E Richards; Brenda L Bohnsack
Journal:  J Ophthalmol       Date:  2018-04-04       Impact factor: 1.909

6.  11p13 deletions can be more frequent than the PAX6 gene point mutations in Polish patients with aniridia.

Authors:  Anna Wawrocka; Agata Sikora; Lukasz Kuszel; Maciej R Krawczynski
Journal:  J Appl Genet       Date:  2013-06-13       Impact factor: 3.240

7.  A large novel deletion downstream of PAX6 gene in a Chinese family with ocular coloboma.

Authors:  Hong Guo; Limeng Dai; Yanming Huang; Qiong Liao; Yun Bai
Journal:  PLoS One       Date:  2013-12-11       Impact factor: 3.240

  7 in total

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