Literature DB >> 21984770

CAMBerVis: visualization software to support comparative analysis of multiple bacterial strains.

Michał Woźniak1, Limsoon Wong, Jerzy Tiuryn.   

Abstract

MOTIVATION: A number of inconsistencies in genome annotations are documented among bacterial strains. Visualization of the differences may help biologists to make correct decisions in spurious cases.
RESULTS: We have developed a visualization tool, CAMBerVis, to support comparative analysis of multiple bacterial strains. The software manages simultaneous visualization of multiple bacterial genomes, enabling visual analysis focused on genome structure annotations. AVAILABILITY: The CAMBerVis software is freely available at the project website: http://bioputer.mimuw.edu.pl/camber. Input datasets for Mycobacterium tuberculosis and Staphylocacus aureus are integrated with the software as examples. CONTACT: m.wozniak@mimuw.edu.pl SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

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Year:  2011        PMID: 21984770     DOI: 10.1093/bioinformatics/btr561

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  1 in total

1.  eCAMBer: efficient support for large-scale comparative analysis of multiple bacterial strains.

Authors:  Michal Wozniak; Limsoon Wong; Jerzy Tiuryn
Journal:  BMC Bioinformatics       Date:  2014-03-05       Impact factor: 3.169

  1 in total

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