Literature DB >> 21984679

Actinokineospora soli sp. nov., a thermotolerant actinomycete isolated from soil, and emended description of the genus Actinokineospora.

Xia Tang1, Yu Zhou2,1, Jing Zhang3,1, Hong Ming4, Guo-Xing Nie5, Ling-Ling Yang1, Shu-Kun Tang1, Wen-Jun Li6,1.   

Abstract

A strain of thermotolerant actinomycete, designated YIM 75948(T), was isolated from a soil sample in Yunnan province, China. The strain grew at 25-55 °C (optimum 37 °C). The substrate mycelium and aerial mycelium produced on Czapek's agar were both pale yellow to white. The diagnostic diamino acid of the cell-wall peptidoglycan was meso-diaminopimelic acid, and the whole-cell sugars were mannose, ribose, glucose, galactose and arabinose. The major fatty acids were iso-C(15:0), iso-C(16:0) and C(16:0) and the predominant respiratory quinone was MK-9(H(4))(.) The polar lipids consisted of phosphatidylethanolamine, phosphatidylethanolamine with hydroxy fatty acids, diphosphatidylglycerol, phosphatidylinositol and two unidentified phospholipids. The genomic DNA G+C content was 73.8 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain YIM 75948(T) belonged in the genus Actinokineospora and that its closest relative among recognized species was Actinokineospora fastidiosa DSM 43855(T) (97.6% sequence similarity). The mean level of DNA-DNA relatedness between the novel strain and A. fastidiosa DSM 43855(T) was, however, only 47.8%. Based on the phenotypic, chemotaxonomic and phylogenetic data and the results of the DNA-DNA hybridizations, strain YIM 75948(T) represents a novel species of the genus Actinokineospora for which the name Actinokineospora soli sp. nov. is proposed. The type strain is YIM 75948(T) ( =JCM 17695(T) =DSM 45613(T)). The description of the genus Actinokineospora is emended to reflect the fact that the genomic DNA G+C contents of A. fastidiosa DSM 43855(T) and the type strain of Actinokineospora soli sp. nov. recorded in the present study fell above the range given in previous descriptions of this genus.

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Year:  2011        PMID: 21984679     DOI: 10.1099/ijs.0.035832-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

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Authors:  Imen Nouioui; Lorena Carro; Marina García-López; Jan P Meier-Kolthoff; Tanja Woyke; Nikos C Kyrpides; Rüdiger Pukall; Hans-Peter Klenk; Michael Goodfellow; Markus Göker
Journal:  Front Microbiol       Date:  2018-08-22       Impact factor: 5.640

Review 2.  Thermophilic and alkaliphilic Actinobacteria: biology and potential applications.

Authors:  L Shivlata; Tulasi Satyanarayana
Journal:  Front Microbiol       Date:  2015-09-25       Impact factor: 5.640

3.  Draft Genome Sequence of the Antitrypanosomally Active Sponge-Associated Bacterium Actinokineospora sp. Strain EG49.

Authors:  Janno Harjes; Taewoo Ryu; Usama Ramadan Abdelmohsen; Lucas Moitinho-Silva; Hannes Horn; Timothy Ravasi; Ute Hentschel
Journal:  Genome Announc       Date:  2014-03-06

4.  Production of induced secondary metabolites by a co-culture of sponge-associated actinomycetes, Actinokineospora sp. EG49 and Nocardiopsis sp. RV163.

Authors:  Yousef Dashti; Tanja Grkovic; Usama Ramadan Abdelmohsen; Ute Hentschel; Ronald J Quinn
Journal:  Mar Drugs       Date:  2014-05-22       Impact factor: 5.118

5.  Dereplication strategies for targeted isolation of new antitrypanosomal actinosporins A and B from a marine sponge associated-Actinokineospora sp. EG49.

Authors:  Usama Ramadan Abdelmohsen; Cheng Cheng; Christina Viegelmann; Tong Zhang; Tanja Grkovic; Safwat Ahmed; Ronald J Quinn; Ute Hentschel; RuAngelie Edrada-Ebel
Journal:  Mar Drugs       Date:  2014-03-06       Impact factor: 5.118

  5 in total

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