Literature DB >> 21984505

A general fast registration framework by learning deformation-appearance correlation.

Minjeong Kim1, Guorong Wu, Pew-Thian Yap, Dinggang Shen.   

Abstract

In this paper, we propose a general framework for performance improvement of the current state-of-the-art registration algorithms in terms of both accuracy and computation time. The key concept involves rapid prediction of a deformation field for registration initialization, which is achieved by a statistical correlation model learned between image appearances and deformation fields. This allows us to immediately bring a template image as close as possible to a subject image that we need to register. The task of the registration algorithm is hence reduced to estimating small deformation between the subject image and the initially warped template image, i.e., the intermediate template (IT). Specifically, to obtain a good subject-specific initial deformation, support vector regression is utilized to determine the correlation between image appearances and their respective deformation fields. When registering a new subject onto the template, an initial deformation field is first predicted based on the subject's image appearance for generating an IT. With the IT, only the residual deformation needs to be estimated, presenting much less challenge to the existing registration algorithms. Our learning-based framework affords two important advantages: 1) by requiring only the estimation of the residual deformation between the IT and the subject image, the computation time can be greatly reduced; 2) by leveraging good deformation initialization, local minima giving suboptimal solution could be avoided. Our framework has been extensively evaluated using medical images from different sources, and the results indicate that, on top of accuracy improvement, significant registration speedup can be achieved, as compared with the case where no prediction of initial deformation is performed.

Entities:  

Mesh:

Year:  2011        PMID: 21984505      PMCID: PMC3355525          DOI: 10.1109/TIP.2011.2170698

Source DB:  PubMed          Journal:  IEEE Trans Image Process        ISSN: 1057-7149            Impact factor:   10.856


  33 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Spatial transformation and registration of brain images using elastically deformable models.

Authors:  C Davatzikos
Journal:  Comput Vis Image Underst       Date:  1997-05       Impact factor: 3.876

3.  Detection of grey matter loss in mild Alzheimer's disease with voxel based morphometry.

Authors:  G B Frisoni; C Testa; A Zorzan; F Sabattoli; A Beltramello; H Soininen; M P Laakso
Journal:  J Neurol Neurosurg Psychiatry       Date:  2002-12       Impact factor: 10.154

4.  Non-rigid image registration using a statistical spline deformation model.

Authors:  Dirk Loeckx; Frederik Maes; Dirk Vandermeulen; Paul Suetens
Journal:  Inf Process Med Imaging       Date:  2003-07

Review 5.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

6.  Construction of a 3D probabilistic atlas of human cortical structures.

Authors:  David W Shattuck; Mubeena Mirza; Vitria Adisetiyo; Cornelius Hojatkashani; Georges Salamon; Katherine L Narr; Russell A Poldrack; Robert M Bilder; Arthur W Toga
Journal:  Neuroimage       Date:  2007-11-26       Impact factor: 6.556

7.  Deformable templates using large deformation kinematics.

Authors:  G E Christensen; R D Rabbitt; M I Miller
Journal:  IEEE Trans Image Process       Date:  1996       Impact factor: 10.856

8.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

9.  Image matching as a diffusion process: an analogy with Maxwell's demons.

Authors:  J P Thirion
Journal:  Med Image Anal       Date:  1998-09       Impact factor: 8.545

10.  Shape and size of the corpus callosum in schizophrenia and schizotypal personality disorder.

Authors:  J E Downhill; M S Buchsbaum; T Wei; J Spiegel-Cohen; E A Hazlett; M M Haznedar; J Silverman; L J Siever
Journal:  Schizophr Res       Date:  2000-05-05       Impact factor: 4.939

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  11 in total

1.  Joint learning of appearance and transformation for predicting brain MR image registration.

Authors:  Qian Wang; Minjeong Kim; Guorong Wu; Dinggang Shen
Journal:  Inf Process Med Imaging       Date:  2013

2.  BIRNet: Brain image registration using dual-supervised fully convolutional networks.

Authors:  Jingfan Fan; Xiaohuan Cao; Pew-Thian Yap; Dinggang Shen
Journal:  Med Image Anal       Date:  2019-03-22       Impact factor: 8.545

Review 3.  Deformable medical image registration: a survey.

Authors:  Aristeidis Sotiras; Christos Davatzikos; Nikos Paragios
Journal:  IEEE Trans Med Imaging       Date:  2013-05-31       Impact factor: 10.048

4.  Improved image registration by sparse patch-based deformation estimation.

Authors:  Minjeong Kim; Guorong Wu; Qian Wang; Seong-Whan Lee; Dinggang Shen
Journal:  Neuroimage       Date:  2014-10-16       Impact factor: 6.556

5.  Comparative evaluation of registration algorithms in different brain databases with varying difficulty: results and insights.

Authors:  Yangming Ou; Hamed Akbari; Michel Bilello; Xiao Da; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2014-06-13       Impact factor: 10.048

6.  A Learning Based Fiducial-driven Registration Scheme for Evaluating Laser Ablation Changes in Neurological Disorders.

Authors:  Tao Wan; B Nicolas Bloch; Shabbar Danish; Anant Madabhushi
Journal:  Neurocomputing       Date:  2014-11-20       Impact factor: 5.719

7.  Deformable Image Registration based on Similarity-Steered CNN Regression.

Authors:  Xiaohuan Cao; Jianhua Yang; Jun Zhang; Dong Nie; Min-Jeong Kim; Qian Wang; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

8.  Predict brain MR image registration via sparse learning of appearance and transformation.

Authors:  Qian Wang; Minjeong Kim; Yonghong Shi; Guorong Wu; Dinggang Shen
Journal:  Med Image Anal       Date:  2014-11-08       Impact factor: 8.545

9.  3-D Measurements of Acceleration-Induced Brain Deformation via Harmonic Phase Analysis and Finite-Element Models.

Authors:  Arnold D Gomez; Andrew K Knutsen; Fangxu Xing; Yuan-Chiao Lu; Deva Chan; Dzung L Pham; Philip Bayly; Jerry L Prince
Journal:  IEEE Trans Biomed Eng       Date:  2018-10-08       Impact factor: 4.538

10.  Deformable Image Registration Using a Cue-Aware Deep Regression Network.

Authors:  Xiaohuan Cao; Jianhua Yang; Jun Zhang; Qian Wang; Pew-Thian Yap; Dinggang Shen
Journal:  IEEE Trans Biomed Eng       Date:  2018-04-04       Impact factor: 4.538

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