Literature DB >> 21981911

Insulators organize chromatin: emerging rules of the game.

Margarita Krivega1, Ann Dean.   

Abstract

In this issue of Molecular Cell, Wood et al. (2011) provide mechanistic insight into the regulation of insulators that helps explain how they can organize chromatin in a cell type-specific fashion.
Copyright © 2011 Elsevier Inc. All rights reserved.

Entities:  

Year:  2011        PMID： 21981911      PMCID： PMC3204877          DOI： 10.1016/j.molcel.2011.09.009

Source DB:  PubMed          Journal:  Mol Cell        ISSN： 1097-2765            Impact factor:   17.970


  11 in total

Review 1.  We gather together: insulators and genome organization.

Authors:  Julie A Wallace; Gary Felsenfeld
Journal:  Curr Opin Genet Dev       Date:  2007-10-24       Impact factor: 5.578

2.  A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber.

Authors:  Itys Comet; Bernd Schuettengruber; Tom Sexton; Giacomo Cavalli
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-24       Impact factor: 11.205

3.  Regulation of chromatin organization and inducible gene expression by a Drosophila insulator.

Authors:  Ashley M Wood; Kevin Van Bortle; Edward Ramos; Naomi Takenaka; Margaret Rohrbaugh; Brian C Jones; Keith C Jones; Victor G Corces
Journal:  Mol Cell       Date:  2011-10-07       Impact factor: 17.970

4.  Three subclasses of a Drosophila insulator show distinct and cell type-specific genomic distributions.

Authors:  Ashley M Bushey; Edward Ramos; Victor G Corces
Journal:  Genes Dev       Date:  2009-05-14       Impact factor: 11.361

5.  Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains.

Authors:  Suresh Cuddapah; Raja Jothi; Dustin E Schones; Tae-Young Roh; Kairong Cui; Keji Zhao
Journal:  Genome Res       Date:  2008-12-03       Impact factor: 9.043

6.  Comprehensive mapping of long-range interactions reveals folding principles of the human genome.

Authors:  Erez Lieberman-Aiden; Nynke L van Berkum; Louise Williams; Maxim Imakaev; Tobias Ragoczy; Agnes Telling; Ido Amit; Bryan R Lajoie; Peter J Sabo; Michael O Dorschner; Richard Sandstrom; Bradley Bernstein; M A Bender; Mark Groudine; Andreas Gnirke; John Stamatoyannopoulos; Leonid A Mirny; Eric S Lander; Job Dekker
Journal:  Science       Date:  2009-10-09       Impact factor: 47.728

7.  CTCF-mediated functional chromatin interactome in pluripotent cells.

Authors:  Lusy Handoko; Han Xu; Guoliang Li; Chew Yee Ngan; Elaine Chew; Marie Schnapp; Charlie Wah Heng Lee; Chaopeng Ye; Joanne Lim Hui Ping; Fabianus Mulawadi; Eleanor Wong; Jianpeng Sheng; Yubo Zhang; Thompson Poh; Chee Seng Chan; Galih Kunarso; Atif Shahab; Guillaume Bourque; Valere Cacheux-Rataboul; Wing-Kin Sung; Yijun Ruan; Chia-Lin Wei
Journal:  Nat Genet       Date:  2011-06-19       Impact factor: 38.330

8.  Intra- and inter-chromosomal interactions correlate with CTCF binding genome wide.

Authors:  Marco Botta; Syed Haider; Ian X Y Leung; Pietro Lio; Julien Mozziconacci
Journal:  Mol Syst Biol       Date:  2010-11-02       Impact factor: 11.429

9.  A role for cohesin in T-cell-receptor rearrangement and thymocyte differentiation.

Authors:  Vlad C Seitan; Bingtao Hao; Kikuë Tachibana-Konwalski; Thais Lavagnolli; Hegias Mira-Bontenbal; Karen E Brown; Grace Teng; Tom Carroll; Anna Terry; Katie Horan; Hendrik Marks; David J Adams; David G Schatz; Luis Aragon; Amanda G Fisher; Michael S Krangel; Kim Nasmyth; Matthias Merkenschlager
Journal:  Nature       Date:  2011-08-10       Impact factor: 49.962

10.  Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus.

Authors:  Suzana Hadjur; Luke M Williams; Natalie K Ryan; Bradley S Cobb; Tom Sexton; Peter Fraser; Amanda G Fisher; Matthias Merkenschlager
Journal:  Nature       Date:  2009-05-20       Impact factor: 49.962
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  2 in total

Review 1.  Higher order genomic organization and epigenetic control maintain cellular identity and prevent breast cancer.

Authors:  A J Fritz; N E Gillis; D L Gerrard; P D Rodriguez; D Hong; J T Rose; P N Ghule; E L Bolf; J A Gordon; C E Tye; J R Boyd; K M Tracy; J A Nickerson; A J van Wijnen; A N Imbalzano; J L Heath; S E Frietze; S K Zaidi; F E Carr; J B Lian; J L Stein; G S Stein
Journal:  Genes Chromosomes Cancer       Date:  2019-03-15       Impact factor: 5.006

2.  Insulators target active genes to transcription factories and polycomb-repressed genes to polycomb bodies.

Authors:  Hua-Bing Li; Katsuhito Ohno; Hongxing Gui; Vincenzo Pirrotta
Journal:  PLoS Genet       Date:  2013-04-18       Impact factor: 5.917
  2 in total

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