Literature DB >> 21981143

Cellular strategies for making monoubiquitin signals.

Harish N Ramanathan1, Yihong Ye.   

Abstract

Post-translational modification of proteins with ubiquitin regulates a variety of eukaryotic cellular processes. Ubiquitin can be conjugated to substrates either as a single moiety (monoubiquitination) or as isopeptide bond-linked chains (polyubiquitination), creating an array of ubiquitin signals. It has been established that monoubiquitination can serve important functions in many biological processes such as the regulation of gene transcription, protein trafficking, and DNA repair. Surprisingly, little is known about the mechanisms by which monoubiquitin signals are produced in the cell. Here, we discuss the potential cellular strategies for generating monoubiquitinated proteins using a few, relatively well characterized examples of monoubiquitinated proteins. These strategies include coupling ubiquitination to low affinity ubiquitin binding, using monoubiquitination-dedicated E2 conjugating enzymes, and restricting ubiquitin chain elongation. Some of these principles may be applicable to protein modifications involving ubiquitin like proteins (UBLs), which often occur in monomeric form.

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Year:  2011        PMID: 21981143      PMCID: PMC3476054          DOI: 10.3109/10409238.2011.620943

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  95 in total

1.  Monoubiquitination of human histone H2B: the factors involved and their roles in HOX gene regulation.

Authors:  Bing Zhu; Yong Zheng; Anh-Dung Pham; Subhrangsu S Mandal; Hediye Erdjument-Bromage; Paul Tempst; Danny Reinberg
Journal:  Mol Cell       Date:  2005-11-23       Impact factor: 17.970

2.  Priming and extending: a UbcH5/Cdc34 E2 handoff mechanism for polyubiquitination on a SCF substrate.

Authors:  Kenneth Wu; Jordan Kovacev; Zhen-Qiang Pan
Journal:  Mol Cell       Date:  2010-03-26       Impact factor: 17.970

3.  Regulation of translesion synthesis DNA polymerase eta by monoubiquitination.

Authors:  Marzena Bienko; Catherine M Green; Simone Sabbioneda; Nicola Crosetto; Ivan Matic; Richard G Hibbert; Tihana Begovic; Atsuko Niimi; Matthias Mann; Alan R Lehmann; Ivan Dikic
Journal:  Mol Cell       Date:  2010-02-12       Impact factor: 17.970

4.  Crystal structure of UbcH5b~ubiquitin intermediate: insight into the formation of the self-assembled E2~Ub conjugates.

Authors:  Eri Sakata; Tadashi Satoh; Shunsuke Yamamoto; Yoshiki Yamaguchi; Maho Yagi-Utsumi; Eiji Kurimoto; Keiji Tanaka; Soichi Wakatsuki; Koichi Kato
Journal:  Structure       Date:  2010-01-13       Impact factor: 5.006

5.  Monoubiquitination of RPN10 regulates substrate recruitment to the proteasome.

Authors:  Marta Isasa; Elijah J Katz; Woong Kim; Verónica Yugo; Sheyla González; Donald S Kirkpatrick; Timothy M Thomson; Daniel Finley; Steven P Gygi; Bernat Crosas
Journal:  Mol Cell       Date:  2010-06-11       Impact factor: 17.970

6.  Taf1 regulates Pax3 protein by monoubiquitination in skeletal muscle progenitors.

Authors:  Stéphane C Boutet; Stefano Biressi; Kevin Iori; Vanita Natu; Thomas A Rando
Journal:  Mol Cell       Date:  2010-12-10       Impact factor: 17.970

7.  Molecular basis for lysine specificity in the yeast ubiquitin-conjugating enzyme Cdc34.

Authors:  Martin Sadowski; Randy Suryadinata; Xianning Lai; Jörg Heierhorst; Boris Sarcevic
Journal:  Mol Cell Biol       Date:  2010-03-01       Impact factor: 4.272

8.  Catalysis of lysine 48-specific ubiquitin chain assembly by residues in E2 and ubiquitin.

Authors:  Monica C Rodrigo-Brenni; Scott A Foster; David O Morgan
Journal:  Mol Cell       Date:  2010-08-27       Impact factor: 17.970

9.  A dual E3 mechanism for Rub1 ligation to Cdc53.

Authors:  Daniel C Scott; Julie K Monda; Christy R R Grace; David M Duda; Richard W Kriwacki; Thimo Kurz; Brenda A Schulman
Journal:  Mol Cell       Date:  2010-09-10       Impact factor: 17.970

10.  Mechanistic analysis of PCNA poly-ubiquitylation by the ubiquitin protein ligases Rad18 and Rad5.

Authors:  Joanne L Parker; Helle D Ulrich
Journal:  EMBO J       Date:  2009-10-22       Impact factor: 11.598

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  30 in total

Review 1.  The role of deubiquitinating enzymes in spermatogenesis.

Authors:  Bharathi Suresh; Junwon Lee; Seok-Ho Hong; Kye-Seong Kim; Suresh Ramakrishna
Journal:  Cell Mol Life Sci       Date:  2015-09-08       Impact factor: 9.261

2.  Dimeric Ube2g2 simultaneously engages donor and acceptor ubiquitins to form Lys48-linked ubiquitin chains.

Authors:  Weixiao Liu; Yongliang Shang; Yan Zeng; Chao Liu; Yanchang Li; Linhui Zhai; Pan Wang; Jizhong Lou; Ping Xu; Yihong Ye; Wei Li
Journal:  EMBO J       Date:  2013-12-23       Impact factor: 11.598

3.  Cholera toxin enhances Na(+) absorption across MCF10A human mammary epithelia.

Authors:  Qian Wang; Bruce D Schultz
Journal:  Am J Physiol Cell Physiol       Date:  2013-12-26       Impact factor: 4.249

Review 4.  The Fanconi anemia ID2 complex: dueling saxes at the crossroads.

Authors:  Rebecca A Boisvert; Niall G Howlett
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

Review 5.  Regulation of pluripotency and differentiation by deubiquitinating enzymes.

Authors:  B Suresh; J Lee; H Kim; S Ramakrishna
Journal:  Cell Death Differ       Date:  2016-06-10       Impact factor: 15.828

Review 6.  Functions of the 19S complex in proteasomal degradation.

Authors:  Chang-Wei Liu; Andrew D Jacobson
Journal:  Trends Biochem Sci       Date:  2013-01-02       Impact factor: 13.807

7.  E3-Independent Constitutive Monoubiquitination Complements Histone Methyltransferase Activity of SETDB1.

Authors:  Lidong Sun; Jia Fang
Journal:  Mol Cell       Date:  2016-05-26       Impact factor: 17.970

Review 8.  RING-type E3 ligases: master manipulators of E2 ubiquitin-conjugating enzymes and ubiquitination.

Authors:  Meredith B Metzger; Jonathan N Pruneda; Rachel E Klevit; Allan M Weissman
Journal:  Biochim Biophys Acta       Date:  2013-06-06

9.  Post-Transcriptional Coordination of the Arabidopsis Iron Deficiency Response is Partially Dependent on the E3 Ligases RING DOMAIN LIGASE1 (RGLG1) and RING DOMAIN LIGASE2 (RGLG2).

Authors:  I-Chun Pan; Huei-Hsuan Tsai; Ya-Tan Cheng; Tuan-Nan Wen; Thomas J Buckhout; Wolfgang Schmidt
Journal:  Mol Cell Proteomics       Date:  2015-08-07       Impact factor: 5.911

10.  Role of E2-RING Interactions in Governing RNF4-Mediated Substrate Ubiquitination.

Authors:  Anthony DiBello; Ajit B Datta; Xiangbin Zhang; Cynthia Wolberger
Journal:  J Mol Biol       Date:  2016-09-24       Impact factor: 5.469

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