Literature DB >> 21980031

Complete genome sequence of human adenovirus prototype 17.

Shoaleh Dehghan1, Jason Seto, Nolan R Hudson, Christopher M Robinson, Morris S Jones, David W Dyer, James Chodosh, Donald Seto.   

Abstract

As one of the first five human adenoviruses (HAdVs) to be sequenced, type 17 was important as a reference tool for comparative genomics of recently isolated HAdV pathogens in species D. HAdV-D17 was the first species D adenovirus to be sequenced and was deposited in GenBank in 1999. These genome data were not of high quality, and a redetermination of the same stock virus provides corrected data; among the differences are a length of 35,139 bp versus 35,100 bp in the original, and 160 mismatches to the original genome were found. Annotation of the coding sequences reveals 39 as opposed to 8, a finding which is important for phylogenomic studies.

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Year:  2011        PMID: 21980031      PMCID: PMC3194981          DOI: 10.1128/JVI.06051-11

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  7 in total

1.  Adenoviruses isolated from Saudi Arabia. II. Pathogenicity of certain strains for man.

Authors:  M FENG; R S CHANG; T R SMITH; J C SYNDER
Journal:  Am J Trop Med Hyg       Date:  1959-07       Impact factor: 2.345

2.  Computational analysis and identification of an emergent human adenovirus pathogen implicated in a respiratory fatality.

Authors:  Christopher M Robinson; Gurdeep Singh; Cécile Henquell; Michael P Walsh; Hélène Peigue-Lafeuille; Donald Seto; Morris S Jones; David W Dyer; James Chodosh
Journal:  Virology       Date:  2010-11-05       Impact factor: 3.616

3.  Genomic and bioinformatics analysis of HAdV-4, a human adenovirus causing acute respiratory disease: implications for gene therapy and vaccine vector development.

Authors:  Anjan Purkayastha; Susan E Ditty; Jing Su; John McGraw; Ted L Hadfield; Clark Tibbetts; Donald Seto
Journal:  J Virol       Date:  2005-02       Impact factor: 5.103

4.  Antigenic relationships among the 47 human adenoviruses determined in reference horse antisera.

Authors:  J C Hierholzer; Y O Stone; J R Broderson
Journal:  Arch Virol       Date:  1991       Impact factor: 2.574

5.  Genetic analysis of a novel human adenovirus with a serologically unique hexon and a recombinant fiber gene.

Authors:  Elizabeth B Liu; Leonardo Ferreyra; Stephen L Fischer; Jorge V Pavan; Silvia V Nates; Nolan Ryan Hudson; Damaris Tirado; David W Dyer; James Chodosh; Donald Seto; Morris S Jones
Journal:  PLoS One       Date:  2011-09-07       Impact factor: 3.240

6.  Applying genomic and bioinformatic resources to human adenovirus genomes for use in vaccine development and for applications in vector development for gene delivery.

Authors:  Jason Seto; Michael P Walsh; Padmanabhan Mahadevan; Qiwei Zhang; Donald Seto
Journal:  Viruses       Date:  2010-01-06       Impact factor: 5.818

7.  Evidence of molecular evolution driven by recombination events influencing tropism in a novel human adenovirus that causes epidemic keratoconjunctivitis.

Authors:  Michael P Walsh; Ashish Chintakuntlawar; Christopher M Robinson; Ijad Madisch; Balázs Harrach; Nolan R Hudson; David Schnurr; Albert Heim; James Chodosh; Donald Seto; Morris S Jones
Journal:  PLoS One       Date:  2009-06-03       Impact factor: 3.240

  7 in total
  5 in total

1.  Parp3 promotes long-range end joining in murine cells.

Authors:  Jacob V Layer; J Patrick Cleary; Alexander J Brown; Kristen E Stevenson; Sara N Morrow; Alexandria Van Scoyk; Rafael B Blasco; Elif Karaca; Fei-Long Meng; Richard L Frock; Trevor Tivey; Sunhee Kim; Hailey Fuchs; Roberto Chiarle; Frederick W Alt; Steven A Roberts; David M Weinstock; Tovah A Day
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-13       Impact factor: 11.205

2.  Broad-range PCR-electrospray ionization mass spectrometry for detection and typing of adenovirus and other opportunistic viruses in stem cell transplant patients.

Authors:  Jérôme Legoff; Linda Feghoul; Séverine Mercier-Delarue; Jean-Hugues Dalle; Catherine Scieux; Janine Chérot; Flore Sicre de Fontbrune; André Baruchel; Gérard Socié; François Simon
Journal:  J Clin Microbiol       Date:  2013-10-09       Impact factor: 5.948

3.  Genome and bioinformatic analysis of a HAdV-B14p1 virus isolated from a baby with pneumonia in Beijing, China.

Authors:  Liuying Tang; Junjing An; Zhengde Xie; Shoaleh Dehghan; Donald Seto; Wenbo Xu; Yixin Ji
Journal:  PLoS One       Date:  2013-03-29       Impact factor: 3.240

4.  Α molecular epidemiological analysis of adenoviruses from excess conjunctivitis cases.

Authors:  A Balasopoulou; P Κokkinos; D Pagoulatos; P Plotas; O E Makri; C D Georgakopoulos; A Vantarakis
Journal:  BMC Ophthalmol       Date:  2017-04-24       Impact factor: 2.209

Review 5.  Adenoviromics: Mining the Human Adenovirus Species D Genome.

Authors:  Ashrafali M Ismail; Ji Sun Lee; Jeong Yoon Lee; Gurdeep Singh; David W Dyer; Donald Seto; James Chodosh; Jaya Rajaiya
Journal:  Front Microbiol       Date:  2018-09-11       Impact factor: 5.640

  5 in total

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