Literature DB >> 21978454

Molecular characterizations and functional assessments of GATA-3 and its splice variant in Atlantic cod (Gadus morhua L.).

Heng Chi1, Zuobing Zhang, Makoto Inami, Jarl Bøgwald, Wenbin Zhan, Roy A Dalmo.   

Abstract

GATA-3 is a master transcription factor of the Th2 cells. We have identified GATA-3 cDNA and its splice variant in Atlantic cod. Cod GATA-3 (GmGATA-3) has a 1320 b p open reading frame encoding a polypeptide of 440 amino acids with two zinc finger domains that are well conserved within teleosts and higher vertebrates. The GATA-3 cDNA splice variant without zinc finger domains was shown to contain an 828 b p open reading frame encoding a polypeptide of 276 amino acids. Both GATA-3 proteins fused with RFP-tag were identified in or close to the nuclei 48 h after the plasmids were transfected in CHSE-214 cells. The full length GATA-3 with two zinc finger domains has a transcriptional function confirmed by transfection with GATA-3 reporter vector along with expression constructs of GATA-3 plasmids in CHSE-214 cells, whereas the GATA-3 splice variant without zinc finger domain did not enhance the activity of the GATA-3 reporter vector, and no interference was found between these two GATA-3 variants. RT-PCR analysis revealed that the two Atlantic cod GATA-3 variants were strongly expressed in the gills and infection with live Vibrio anguillarum induced the spleen expression of both GmGATA-3L and GmGATA-3S. Unexpectedly, PMA increased the expression of the GATA-3 splice variant in vivo and especially in vitro, with an increase of more than 100,000-fold in head kidney leukocytes at 24 and 48 h. On the other hand, there were no significant increases at the transcript level of full length GATA-3 between Poly I:C and β-glucan treatment groups compared to controls.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21978454     DOI: 10.1016/j.dci.2011.09.004

Source DB:  PubMed          Journal:  Dev Comp Immunol        ISSN: 0145-305X            Impact factor:   3.636


  5 in total

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2.  Efficient Genome Editing in Multiple Salmonid Cell Lines Using Ribonucleoprotein Complexes.

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3.  Alternatively spliced variants in Atlantic cod (Gadus morhua) support response to variable salinity environment.

Authors:  Agnieszka Kijewska; Magdalena Malachowicz; Roman Wenne
Journal:  Sci Rep       Date:  2018-08-02       Impact factor: 4.379

4.  Single-Cell Transcriptome Profiling of Immune Cell Repertoire of the Atlantic Cod Which Naturally Lacks the Major Histocompatibility Class II System.

Authors:  Naomi Croft Guslund; Monica Hongrø Solbakken; Marine S O Brieuc; Sissel Jentoft; Kjetill S Jakobsen; Shuo-Wang Qiao
Journal:  Front Immunol       Date:  2020-10-09       Impact factor: 7.561

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  5 in total

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