Literature DB >> 21975939

Using the PhenX Toolkit to Add Standard Measures to a Study.

Tabitha Hendershot1, Huaqin Pan, Jonathan Haines, William R Harlan, Heather A Junkins, Erin M Ramos, Carol M Hamilton.   

Abstract

The PhenX (consensus measures for Phenotypes and eXposures) Toolkit (https://www.phenxtoolkit.org/) offers high-quality, well-established measures of phenotypes and exposures for use by the scientific community. The Toolkit contains 295 measures drawn from 21 research domains (fields of research). The measures were selected by Working Groups of domain experts using a consensus process that included input from the scientific community. The Toolkit provides a description of each PhenX measure, the rationale for including it in the Toolkit, protocol(s) for collecting the measure, and supporting documentation. Users can browse by measures, domains, or collections, or can search the Toolkit using the Smart Query Tool. Once users have selected some measures, they can download a customized Data Collection Worksheet that specifies what information needs to be collected, and a Data Dictionary that describes each variable included in their Data Collection Worksheet. To help researchers find studies with comparable data, PhenX measures and variables are being mapped to studies in the database of Genotypes and Phenotypes (dbGaP).
© 2011 by John Wiley & Sons, Inc.

Mesh:

Year:  2011        PMID: 21975939     DOI: 10.1002/0471142905.hg0121s71

Source DB:  PubMed          Journal:  Curr Protoc Hum Genet        ISSN: 1934-8258


  11 in total

1.  Using PhenX measures to identify opportunities for cross-study analysis.

Authors:  Huaqin Pan; Kimberly A Tryka; Daniel J Vreeman; Wayne Huggins; Michael J Phillips; Jayashri P Mehta; Jacqueline H Phillips; Clement J McDonald; Heather A Junkins; Erin M Ramos; Carol M Hamilton
Journal:  Hum Mutat       Date:  2012-04-03       Impact factor: 4.878

2.  Sharing behavioral data through a grid infrastructure using data standards.

Authors:  Hua Min; Riki Ohira; Michael A Collins; Jessica Bondy; Nancy E Avis; Olga Tchuvatkina; Paul K Courtney; Richard P Moser; Abdul R Shaikh; Bradford W Hesse; Mary Cooper; Dianne Reeves; Bob Lanese; Cindy Helba; Suzanne M Miller; Eric A Ross
Journal:  J Am Med Inform Assoc       Date:  2013-09-27       Impact factor: 4.497

3.  Nighttime Waking to Smoke, Stress, and Nicotine Addiction.

Authors:  Steven A Branstetter; Nicolle M Krebs; Joshua E Muscat
Journal:  Behav Sleep Med       Date:  2021-10-19       Impact factor: 3.492

Review 4.  Addictions Neuroclinical Assessment: A Neuroscience-Based Framework for Addictive Disorders.

Authors:  Laura E Kwako; Reza Momenan; Raye Z Litten; George F Koob; David Goldman
Journal:  Biol Psychiatry       Date:  2015-11-17       Impact factor: 13.382

5.  Characterizing the phenotype of advanced pelvic organ prolapse.

Authors:  Pamela J Levin; Anthony G Visco; Svati H Shah; Rebekah G Fulton; Jennifer M Wu
Journal:  Female Pelvic Med Reconstr Surg       Date:  2012 Sep-Oct       Impact factor: 2.091

Review 6.  From Data to Action: Neuroepidemiology Informs Implementation Research for Global Stroke Prevention and Treatment.

Authors:  George A Mensah; Ralph L Sacco; Barbara G Vickrey; Uchechukwu K A Sampson; Salina Waddy; Bruce Ovbiagele; Jeyaraj Durai Pandian; Bo Norrving; Valery L Feigin
Journal:  Neuroepidemiology       Date:  2015-10-28       Impact factor: 3.282

7.  The PhenX Toolkit pregnancy and birth collections.

Authors:  Nedra S Whitehead; Jane A Hammond; Michelle A Williams; Wayne Huggins; Sonja Hoover; Carol M Hamilton; Erin M Ramos; Heather A Junkins; William R Harlan; Carol J Hogue
Journal:  Ann Epidemiol       Date:  2012-09-03       Impact factor: 3.797

8.  PhenX RISING: real world implementation and sharing of PhenX measures.

Authors:  Catherine A McCarty; Wayne Huggins; Allison E Aiello; Robert M Bilder; Ahmad Hariri; Terry L Jernigan; Erik Newman; Dharambir K Sanghera; Timothy J Strauman; Yi Zeng; Erin M Ramos; Heather A Junkins
Journal:  BMC Med Genomics       Date:  2014-03-20       Impact factor: 3.063

9.  Using the PhenX Toolkit to Select Standard Measurement Protocols for Your Research Study.

Authors:  Lisa Ann Cox; Stephen Hwang; Jonathan Haines; Erin M Ramos; Catherine A McCarty; Mary L Marazita; Michelle L Engle; Tabitha Hendershot; Huaqin Helen Pan; Carol M Hamilton
Journal:  Curr Protoc       Date:  2021-05

10.  Validation of PhenX measures in the personalized medicine research project for use in gene/environment studies.

Authors:  Catherine A McCarty; Richard Berg; Carla M Rottscheit; Carol J Waudby; Terrie Kitchner; Murray Brilliant; Marylyn D Ritchie
Journal:  BMC Med Genomics       Date:  2014-01-14       Impact factor: 3.063

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