Literature DB >> 21968746

Fungal biodegradation and enzymatic modification of lignin.

Mehdi Dashtban, Heidi Schraft, Tarannum A Syed, Wensheng Qin.   

Abstract

Lignin, the most abundant aromatic biopolymer on Earth, is extremely recalcitrant to degradation. By linking to both hemicellulose and cellulose, it creates a barrier to any solutions or enzymes and prevents the penetration of lignocellulolytic enzymes into the interior lignocellulosic structure. Some basidiomycetes white-rot fungi are able to degrade lignin efficiently using a combination of extracellular ligninolytic enzymes, organic acids, mediators and accessory enzymes. This review describes ligninolytic enzyme families produced by these fungi that are involved in wood decay processes, their molecular structures, biochemical properties and the mechanisms of action which render them attractive candidates in biotechnological applications. These enzymes include phenol oxidase (laccase) and heme peroxidases [lignin peroxidase (LiP), manganese peroxidase (MnP) and versatile peroxidase (VP)]. Accessory enzymes such as H(2)O(2)-generating oxidases and degradation mechanisms of plant cell-wall components in a non-enzymatic manner by production of free hydroxyl radicals (·OH) are also discussed.

Entities:  

Year:  2010        PMID: 21968746      PMCID: PMC3180040     

Source DB:  PubMed          Journal:  Int J Biochem Mol Biol        ISSN: 2152-4114


  111 in total

Review 1.  White-rot fungi and their enzymes for the treatment of industrial dye effluents.

Authors:  Dirk Wesenberg; Irene Kyriakides; Spiros N Agathos
Journal:  Biotechnol Adv       Date:  2003-12       Impact factor: 14.227

2.  Screening of basidiomycetes and xylariaceous fungi for lignin peroxidase and laccase gene-specific sequences.

Authors:  Stephen B Pointing; Anna L Pelling; Gavin J D Smith; Kevin D Hyde; C Adinaryana Reddy
Journal:  Mycol Res       Date:  2005-01

3.  Function of a low molecular peptide generated by cellulolytic fungi for the degradation of native cellulose.

Authors:  Weihua Yang; Jie Liu; Wei Wang; Yingshu Zhang; Peiji Gao
Journal:  Biotechnol Lett       Date:  2004-12       Impact factor: 2.461

4.  Characterization of a hydroxyl-radical-producing glycoprotein and its presumptive genes from the white-rot basidiomycete Phanerochaete chrysosporium.

Authors:  Hiromi Tanaka; Gou Yoshida; Yousuke Baba; Kenta Matsumura; Hiroshi Wasada; Jirou Murata; Mana Agawa; Shuji Itakura; Akio Enoki
Journal:  J Biotechnol       Date:  2006-12-20       Impact factor: 3.307

5.  An extracellular H2O2-requiring enzyme preparation involved in lignin biodegradation by the white rot basidiomycete Phanerochaete chrysosporium.

Authors:  J K Glenn; M A Morgan; M B Mayfield; M Kuwahara; M H Gold
Journal:  Biochem Biophys Res Commun       Date:  1983-08-12       Impact factor: 3.575

6.  Addition of veratryl alcohol oxidase activity to manganese peroxidase by site-directed mutagenesis.

Authors:  S L Timofeevski; G Nie; N S Reading; S D Aust
Journal:  Biochem Biophys Res Commun       Date:  1999-03-24       Impact factor: 3.575

7.  Characteristics and N-terminal amino acid sequence of manganese peroxidase from solid substrate cultures of Agaricus bisporus.

Authors:  V P Lankinen; A M Bonnen; L H Anton; D A Wood; N Kalkkinen; A Hatakka; C F Thurston
Journal:  Appl Microbiol Biotechnol       Date:  2001-03       Impact factor: 4.813

8.  Fungal degradation of wood: initial proteomic analysis of extracellular proteins of Phanerochaete chrysosporium grown on oak substrate.

Authors:  Ahmed Abbas; Hasan Koc; Feng Liu; Ming Tien
Journal:  Curr Genet       Date:  2004-11-18       Impact factor: 3.886

9.  Hydrolysis of animal manure lignocellulosics for reducing sugar production.

Authors:  Zhiyou Wen; Wei Liao; Shulin Chen
Journal:  Bioresour Technol       Date:  2004-01       Impact factor: 9.642

10.  Crystal structure of a blue laccase from Lentinus tigrinus: evidences for intermediates in the molecular oxygen reductive splitting by multicopper oxidases.

Authors:  Marta Ferraroni; Nina M Myasoedova; Vadim Schmatchenko; Alexey A Leontievsky; Ludmila A Golovleva; Andrea Scozzafava; Fabrizio Briganti
Journal:  BMC Struct Biol       Date:  2007-09-26
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  72 in total

1.  Estimating biodiversity of fungi in activated sludge communities using culture-independent methods.

Authors:  Tegan N Evans; Robert J Seviour
Journal:  Microb Ecol       Date:  2011-12-02       Impact factor: 4.552

2.  Effect of different carbon sources on cellulase production by Hypocrea jecorina (Trichoderma reesei) strains.

Authors:  Mehdi Dashtban; Robert Buchkowski; Wensheng Qin
Journal:  Int J Biochem Mol Biol       Date:  2011-09-09

3.  Decoding how a soil bacterium extracts building blocks and metabolic energy from ligninolysis provides road map for lignin valorization.

Authors:  Arul M Varman; Lian He; Rhiannon Follenfant; Weihua Wu; Sarah Wemmer; Steven A Wrobel; Yinjie J Tang; Seema Singh
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-15       Impact factor: 11.205

4.  Arctic marine fungi: biomass, functional genes, and putative ecological roles.

Authors:  B T Hassett; E J Borrego; T R Vonnahme; T Rämä; M V Kolomiets; R Gradinger
Journal:  ISME J       Date:  2019-02-11       Impact factor: 10.302

5.  A 2.08 Å resolution structure of HLB5, a novel cellulase from the anaerobic gut bacterium Parabacteroides johnsonii DSM 18315.

Authors:  Changsoo Chang; Charles Brooke; Hailan Piao; Jamey Mack; Gyorgy Babnigg; Andrzej Joachimiak; Matthias Hess
Journal:  Protein Sci       Date:  2019-02-18       Impact factor: 6.725

Review 6.  Microbial utilization of lignin: available biotechnologies for its degradation and valorization.

Authors:  Martín A Palazzolo; Marcela Kurina-Sanz
Journal:  World J Microbiol Biotechnol       Date:  2016-08-26       Impact factor: 3.312

7.  Effects of calmodulin on expression of lignin-modifying enzymes in Pleurotus ostreatus.

Authors:  Takashi Suetomi; Takaiku Sakamoto; Yoshitaka Tokunaga; Toru Kameyama; Yoichi Honda; Hisatoshi Kamitsuji; Isamu Kameshita; Kousuke Izumitsu; Kazumi Suzuki; Toshikazu Irie
Journal:  Curr Genet       Date:  2014-11-19       Impact factor: 3.886

8.  Fungal Genomes and Insights into the Evolution of the Kingdom.

Authors:  Jason E Stajich
Journal:  Microbiol Spectr       Date:  2017-07

9.  Degradation and polymerization of monolignols by Abortiporus biennis, and induction of its degradation with a reducing agent.

Authors:  Chang-Young Hong; Se-Yeong Park; Seon-Hong Kim; Su-Yeon Lee; Won-Sil Choi; In-Gyu Choi
Journal:  J Microbiol       Date:  2016-09-30       Impact factor: 3.422

10.  Enhancing Mn(II)-Binding and Manganese Peroxidase Activity in a Designed Cytochrome c Peroxidase through Fine-Tuning Secondary-Sphere Interactions.

Authors:  Parisa Hosseinzadeh; Evan N Mirts; Thomas D Pfister; Yi-Gui Gao; Christopher Mayne; Howard Robinson; Emad Tajkhorshid; Yi Lu
Journal:  Biochemistry       Date:  2016-03-02       Impact factor: 3.162

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