Literature DB >> 21966586

Assessing principal component regression prediction of neurochemicals detected with fast-scan cyclic voltammetry.

Richard B Keithley1, R Mark Wightman.   

Abstract

Principal component regression is a multivariate data analysis approach routinely used to predict neurochemical concentrations from in vivo fast-scan cyclic voltammetry measurements. This mathematical procedure can rapidly be employed with present day computer programming languages. Here, we evaluate several methods that can be used to evaluate and improve multivariate concentration determination. The cyclic voltammetric representation of the calculated regression vector is shown to be a valuable tool in determining whether the calculated multivariate model is chemically appropriate. The use of Cook's distance successfully identified outliers contained within in vivo fast-scan cyclic voltammetry training sets. This work also presents the first direct interpretation of a residual color plot and demonstrated the effect of peak shifts on predicted dopamine concentrations. Finally, separate analyses of smaller increments of a single continuous measurement could not be concatenated without substantial error in the predicted neurochemical concentrations due to electrode drift. Taken together, these tools allow for the construction of more robust multivariate calibration models and provide the first approach to assess the predictive ability of a procedure that is inherently impossible to validate because of the lack of in vivo standards.

Entities:  

Year:  2011        PMID: 21966586      PMCID: PMC3182154          DOI: 10.1021/cn200035u

Source DB:  PubMed          Journal:  ACS Chem Neurosci        ISSN: 1948-7193            Impact factor:   4.418


  19 in total

1.  Overoxidation of carbon-fiber microelectrodes enhances dopamine adsorption and increases sensitivity.

Authors:  Michael L A V Heien; Paul E M Phillips; Garret D Stuber; Andrew T Seipel; R Mark Wightman
Journal:  Analyst       Date:  2003-11-11       Impact factor: 4.616

2.  Resolving neurotransmitters detected by fast-scan cyclic voltammetry.

Authors:  Michael L A V Heien; Michael A Johnson; R Mark Wightman
Journal:  Anal Chem       Date:  2004-10-01       Impact factor: 6.986

3.  Characterization of local pH changes in brain using fast-scan cyclic voltammetry with carbon microelectrodes.

Authors:  Pavel Takmakov; Matthew K Zachek; Richard B Keithley; Elizabeth S Bucher; Gregory S McCarty; R Mark Wightman
Journal:  Anal Chem       Date:  2010-11-03       Impact factor: 6.986

4.  Rank estimation and the multivariate analysis of in vivo fast-scan cyclic voltammetric data.

Authors:  Richard B Keithley; Regina M Carelli; R Mark Wightman
Journal:  Anal Chem       Date:  2010-07-01       Impact factor: 6.986

Review 5.  Principles of voltammetry and microelectrode surface states.

Authors:  K T Kawagoe; J B Zimmerman; R M Wightman
Journal:  J Neurosci Methods       Date:  1993-07       Impact factor: 2.390

Review 6.  Deconvolutions based on singular value decomposition and the pseudoinverse: a guide for beginners.

Authors:  R W Hendler; R I Shrager
Journal:  J Biochem Biophys Methods       Date:  1994-01

7.  Dopamine detection with fast-scan cyclic voltammetry used with analog background subtraction.

Authors:  Andre Hermans; Richard B Keithley; Justin M Kita; Leslie A Sombers; R Mark Wightman
Journal:  Anal Chem       Date:  2008-04-24       Impact factor: 6.986

8.  Dopamine release is heterogeneous within microenvironments of the rat nucleus accumbens.

Authors:  R Mark Wightman; Michael L A V Heien; Kate M Wassum; Leslie A Sombers; Brandon J Aragona; Amina S Khan; Jennifer L Ariansen; Joseph F Cheer; Paul E M Phillips; Regina M Carelli
Journal:  Eur J Neurosci       Date:  2007-09-14       Impact factor: 3.386

9.  Rapid dopamine signaling in the nucleus accumbens during contingent and noncontingent cocaine administration.

Authors:  Garret D Stuber; Mitchell F Roitman; Paul E M Phillips; Regina M Carelli; R Mark Wightman
Journal:  Neuropsychopharmacology       Date:  2005-05       Impact factor: 7.853

10.  Chronic microsensors for longitudinal, subsecond dopamine detection in behaving animals.

Authors:  Jeremy J Clark; Stefan G Sandberg; Matthew J Wanat; Jerylin O Gan; Eric A Horne; Andrew S Hart; Christina A Akers; Jones G Parker; Ingo Willuhn; Vicente Martinez; Scott B Evans; Nephi Stella; Paul E M Phillips
Journal:  Nat Methods       Date:  2009-12-27       Impact factor: 28.547

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  40 in total

Review 1.  Fast-Scan Cyclic Voltammetry: Chemical Sensing in the Brain and Beyond.

Authors:  James G Roberts; Leslie A Sombers
Journal:  Anal Chem       Date:  2017-12-15       Impact factor: 6.986

2.  Inhibition of endocannabinoid degradation rectifies motivational and dopaminergic deficits in the Q175 mouse model of Huntington's disease.

Authors:  Dan P Covey; Hannah M Dantrassy; Samantha E Yohn; Alberto Castro; P Jeffrey Conn; Yolanda Mateo; Joseph F Cheer
Journal:  Neuropsychopharmacology       Date:  2018-06-01       Impact factor: 7.853

Review 3.  Examining the complex regulation and drug-induced plasticity of dopamine release and uptake using voltammetry in brain slices.

Authors:  Mark J Ferris; Erin S Calipari; Jordan T Yorgason; Sara R Jones
Journal:  ACS Chem Neurosci       Date:  2013-05-06       Impact factor: 4.418

4.  Failure of Standard Training Sets in the Analysis of Fast-Scan Cyclic Voltammetry Data.

Authors:  Justin A Johnson; Nathan T Rodeberg; R Mark Wightman
Journal:  ACS Chem Neurosci       Date:  2016-01-27       Impact factor: 4.418

5.  Detection of Norepinephrine in Whole Blood via Fast Scan Cyclic Voltammetry.

Authors:  Evan N Nicolai; James K Trevathan; Erika K Ross; J Luis Lujan; Charles D Blaha; Kevin E Bennet; Kendall H Lee; Kip A Ludwig
Journal:  IEEE Int Symp Med Meas Appl       Date:  2017-07-20

6.  Construction of Training Sets for Valid Calibration of in Vivo Cyclic Voltammetric Data by Principal Component Analysis.

Authors:  Nathan T Rodeberg; Justin A Johnson; Courtney M Cameron; Michael P Saddoris; Regina M Carelli; R Mark Wightman
Journal:  Anal Chem       Date:  2015-10-27       Impact factor: 6.986

7.  An Interaction between Serotonin Receptor Signaling and Dopamine Enhances Goal-Directed Vigor and Persistence in Mice.

Authors:  Matthew R Bailey; Olivia Goldman; Estefanía P Bello; Muhammad O Chohan; Nuri Jeong; Vanessa Winiger; Eileen Chun; Elke Schipani; Abigail Kalmbach; Joseph F Cheer; Peter D Balsam; Eleanor H Simpson
Journal:  J Neurosci       Date:  2018-01-24       Impact factor: 6.167

8.  Anatomical and pharmacological characterization of catecholamine transients in the medial prefrontal cortex evoked by ventral tegmental area stimulation.

Authors:  Tatiana A Shnitko; Donita L Robinson
Journal:  Synapse       Date:  2013-11-28       Impact factor: 2.562

Review 9.  Electrochemistry at the Synapse.

Authors:  Mimi Shin; Ying Wang; Jason R Borgus; B Jill Venton
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2019-02-01       Impact factor: 10.745

10.  Subsecond dopamine fluctuations in human striatum encode superposed error signals about actual and counterfactual reward.

Authors:  Kenneth T Kishida; Ignacio Saez; Terry Lohrenz; Mark R Witcher; Adrian W Laxton; Stephen B Tatter; Jason P White; Thomas L Ellis; Paul E M Phillips; P Read Montague
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-23       Impact factor: 11.205

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