Literature DB >> 21965323

Investigations of a compartmental model for leucine kinetics using non-linear mixed effects models with ordinary and stochastic differential equations.

Martin Berglund1, Mikael Sunnåker, Martin Adiels, Mats Jirstrand, Bernt Wennberg.   

Abstract

Non-linear mixed effects (NLME) models represent a powerful tool to simultaneously analyse data from several individuals. In this study, a compartmental model of leucine kinetics is examined and extended with a stochastic differential equation to model non-steady-state concentrations of free leucine in the plasma. Data obtained from tracer/tracee experiments for a group of healthy control individuals and a group of individuals suffering from diabetes mellitus type 2 are analysed. We find that the interindividual variation of the model parameters is much smaller for the NLME models, compared to traditional estimates obtained from each individual separately. Using the mixed effects approach, the population parameters are estimated well also when only half of the data are used for each individual. For a typical individual, the amount of free leucine is predicted to vary with a standard deviation of 8.9% around a mean value during the experiment. Moreover, leucine degradation and protein uptake of leucine is smaller, proteolysis larger and the amount of free leucine in the body is much larger for the diabetic individuals than the control individuals. In conclusion, NLME models offers improved estimates for model parameters in complex models based on tracer/tracee data and may be a suitable tool to reduce data sampling in clinical studies.

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Year:  2011        PMID: 21965323     DOI: 10.1093/imammb/dqr021

Source DB:  PubMed          Journal:  Math Med Biol        ISSN: 1477-8599            Impact factor:   1.854


  10 in total

1.  Exact Gradients Improve Parameter Estimation in Nonlinear Mixed Effects Models with Stochastic Dynamics.

Authors:  Helga Kristin Olafsdottir; Jacob Leander; Joachim Almquist; Mats Jirstrand
Journal:  AAPS J       Date:  2018-08-01       Impact factor: 4.009

2.  Pharmacometrics models with hidden Markovian dynamics.

Authors:  Marc Lavielle
Journal:  J Pharmacokinet Pharmacodyn       Date:  2017-08-31       Impact factor: 2.745

3.  Mixed Effects Modeling Using Stochastic Differential Equations: Illustrated by Pharmacokinetic Data of Nicotinic Acid in Obese Zucker Rats.

Authors:  Jacob Leander; Joachim Almquist; Christine Ahlström; Johan Gabrielsson; Mats Jirstrand
Journal:  AAPS J       Date:  2015-02-19       Impact factor: 4.009

4.  Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models.

Authors:  Martin Berglund; Martin Adiels; Marja-Riitta Taskinen; Jan Borén; Bernt Wennberg
Journal:  PLoS One       Date:  2015-09-30       Impact factor: 3.240

5.  Using sensitivity equations for computing gradients of the FOCE and FOCEI approximations to the population likelihood.

Authors:  Joachim Almquist; Jacob Leander; Mats Jirstrand
Journal:  J Pharmacokinet Pharmacodyn       Date:  2015-03-24       Impact factor: 2.745

6.  A Nonlinear Mixed Effects Approach for Modeling the Cell-To-Cell Variability of Mig1 Dynamics in Yeast.

Authors:  Joachim Almquist; Loubna Bendrioua; Caroline Beck Adiels; Mattias Goksör; Stefan Hohmann; Mats Jirstrand
Journal:  PLoS One       Date:  2015-04-20       Impact factor: 3.240

7.  Modeling Variability in the Progression of Huntington's Disease A Novel Modeling Approach Applied to Structural Imaging Markers from TRACK-HD.

Authors:  J H Warner; C Sampaio
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2016-08-02

8.  Simulation analysis for tumor radiotherapy based on three-component mathematical models.

Authors:  Wen-Song Hong; Gang-Qing Zhang
Journal:  J Appl Clin Med Phys       Date:  2019-03       Impact factor: 2.102

Review 9.  Kinetic Studies to Elucidate Impaired Metabolism of Triglyceride-rich Lipoproteins in Humans.

Authors:  Martin Adiels; Adil Mardinoglu; Marja-Riitta Taskinen; Jan Borén
Journal:  Front Physiol       Date:  2015-11-20       Impact factor: 4.566

10.  A continuous-time adaptive particle filter for estimations under measurement time uncertainties with an application to a plasma-leucine mixed effects model.

Authors:  Annette Krengel; Jan Hauth; Marja-Riitta Taskinen; Martin Adiels; Mats Jirstrand
Journal:  BMC Syst Biol       Date:  2013-01-19
  10 in total

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