Literature DB >> 21963041

Mercury inhibits the L170C mutant of aquaporin Z by making waters clog the water channel.

Yubo Zhang1, Yubao Cui, L Y Chen.   

Abstract

We conduct in silico experiments of the L170C mutant of the Escherichia coli aquaporin Z (AQPZ) with and without mercury bonded to residue Cys 170. We find that bonding mercury to Cys 170 does not induce consequential structural changes to the protein. We further find that mercury does not stick in the middle of the water channel to simply occlude water permeation, but resides on the wall of the water pore. However, we observe that the water permeation coefficient of L170C-Hg(+) (with one mercury ion bonded to Cys 170) is approximately half of that of the mercury-free L170C. We examine the interactions between the mercury ion and the waters in its vicinity and find that five to six waters are strongly attracted by the mercury ion, occluding the space of the water channel. Therefore we conclude that mercury, at low concentration, inhibits AQPZ-L170C mutant by making water molecules clog the water channel. Copyright Â
© 2011 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21963041      PMCID: PMC3210408          DOI: 10.1016/j.bpc.2011.07.006

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  64 in total

Review 1.  Dynamics and energetics of permeation through aquaporins. What do we learn from molecular dynamics simulations?

Authors:  Jochen S Hub; Helmut Grubmüller; Bert L de Groot
Journal:  Handb Exp Pharmacol       Date:  2009

2.  Side-chain dynamics are critical for water permeation through aquaporin-1.

Authors:  Nikolai Smolin; Bin Li; David A C Beck; Valerie Daggett
Journal:  Biophys J       Date:  2008-04-25       Impact factor: 4.033

3.  Structural and dynamical properties of the Hg2+ aqua ion: a molecular dynamics study.

Authors:  Giordano Mancini; Nico Sanna; Vincenzo Barone; Valentina Migliorati; Paola D'Angelo; Giovanni Chillemi
Journal:  J Phys Chem B       Date:  2008-03-27       Impact factor: 2.991

4.  Elucidating membrane protein function through long-timescale molecular dynamics simulation.

Authors:  Ron O Dror; Morten Ø Jensen; David E Shaw
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2009

Review 5.  Plant aquaporin selectivity: where transport assays, computer simulations and physiology meet.

Authors:  Uwe Ludewig; Marek Dynowski
Journal:  Cell Mol Life Sci       Date:  2009-06-30       Impact factor: 9.261

6.  Dynamic control of slow water transport by aquaporin 0: implications for hydration and junction stability in the eye lens.

Authors:  Morten Ø Jensen; Ron O Dror; Huafeng Xu; David W Borhani; Isaiah T Arkin; Michael P Eastwood; David E Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-11       Impact factor: 11.205

7.  Ion exclusion mechanism in aquaporin at an atomistic level.

Authors:  Youn Jo Ko; June Huh; Won Ho Jo
Journal:  Proteins       Date:  2008-03

8.  Nitric oxide conduction by the brain aquaporin AQP4.

Authors:  Yi Wang; Emad Tajkhorshid
Journal:  Proteins       Date:  2010-02-15

9.  To gate or not to gate: using molecular dynamics simulations to morph gated plant aquaporins into constitutively open conformations.

Authors:  Himanshu Khandelia; Morten Ø Jensen; Ole G Mouritsen
Journal:  J Phys Chem B       Date:  2009-04-16       Impact factor: 2.991

10.  Crystal structure of a yeast aquaporin at 1.15 angstrom reveals a novel gating mechanism.

Authors:  Gerhard Fischer; Urszula Kosinska-Eriksson; Camilo Aponte-Santamaría; Madelene Palmgren; Cecilia Geijer; Kristina Hedfalk; Stefan Hohmann; Bert L de Groot; Richard Neutze; Karin Lindkvist-Petersson
Journal:  PLoS Biol       Date:  2009-06-16       Impact factor: 8.029

View more
  3 in total

1.  Population shift between the open and closed states changes the water permeability of an Aquaporin Z mutant.

Authors:  Lin Xin; Claus Hélix-Nielsen; Haibin Su; Jaume Torres; Chuyang Tang; Rong Wang; Anthony Gordon Fane; Yuguang Mu
Journal:  Biophys J       Date:  2012-07-17       Impact factor: 4.033

2.  A Streptococcus aquaporin acts as peroxiporin for efflux of cellular hydrogen peroxide and alleviation of oxidative stress.

Authors:  Huichun Tong; Xinhui Wang; Yuzhu Dong; Qingqing Hu; Ziyi Zhao; Yun Zhu; Linxuan Dong; Fan Bai; Xiuzhu Dong
Journal:  J Biol Chem       Date:  2019-01-31       Impact factor: 5.157

3.  Molecular dynamics simulation and bioinformatics study on chloroplast stromal ridge complex from rice (Oryza sativa L.).

Authors:  Yubo Zhang; Yi Ding
Journal:  BMC Bioinformatics       Date:  2016-01-12       Impact factor: 3.169

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.