Literature DB >> 21962355

Opening the kernel of kernel partial least squares and support vector machines.

G J Postma1, P W T Krooshof, L M C Buydens.   

Abstract

Kernel partial least squares (KPLS) and support vector regression (SVR) have become popular techniques for regression of complex non-linear data sets. The modeling is performed by mapping the data in a higher dimensional feature space through the kernel transformation. The disadvantage of such a transformation is, however, that information about the contribution of the original variables in the regression is lost. In this paper we introduce a method which can retrieve and visualize the contribution of the variables to the regression model and the way the variables contribute to the regression of complex data sets. The method is based on the visualization of trajectories using so-called pseudo samples representing the original variables in the data. We test and illustrate the proposed method to several synthetic and real benchmark data sets. The results show that for linear and non-linear regression models the important variables were identified with corresponding linear or non-linear trajectories. The results were verified by comparing with ordinary PLS regression and by selecting those variables which were indicated as important and rebuilding a model with only those variables.
Copyright © 2011 Elsevier B.V. All rights reserved.

Entities:  

Year:  2011        PMID: 21962355     DOI: 10.1016/j.aca.2011.04.025

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  5 in total

1.  Predicting dissolved oxygen concentration using kernel regression modeling approaches with nonlinear hydro-chemical data.

Authors:  Kunwar P Singh; Shikha Gupta; Premanjali Rai
Journal:  Environ Monit Assess       Date:  2013-12-14       Impact factor: 2.513

2.  Interpretation and visualization of non-linear data fusion in kernel space: study on metabolomic characterization of progression of multiple sclerosis.

Authors:  Agnieszka Smolinska; Lionel Blanchet; Leon Coulier; Kirsten A M Ampt; Theo Luider; Rogier Q Hintzen; Sybren S Wijmenga; Lutgarde M C Buydens
Journal:  PLoS One       Date:  2012-06-08       Impact factor: 3.240

3.  Differentiation Between Organic and Non-Organic Apples Using Diffraction Grating and Image Processing-A Cost-Effective Approach.

Authors:  Nanfeng Jiang; Weiran Song; Hui Wang; Gongde Guo; Yuanyuan Liu
Journal:  Sensors (Basel)       Date:  2018-05-23       Impact factor: 3.576

4.  A quantitative structure-activity relationship study of anti-HIV activity of substituted HEPT using nonlinear models.

Authors:  Hadi Noorizadeh; Sami Sajjadifar; Abbas Farmany
Journal:  Med Chem Res       Date:  2013-02-27       Impact factor: 1.965

5.  SVM-RFE: selection and visualization of the most relevant features through non-linear kernels.

Authors:  Hector Sanz; Clarissa Valim; Esteban Vegas; Josep M Oller; Ferran Reverter
Journal:  BMC Bioinformatics       Date:  2018-11-19       Impact factor: 3.169

  5 in total

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