| Literature DB >> 21961693 |
Mohammadreza Mohebbi1, Rory Wolfe, Damien Jolley.
Abstract
BACKGROUND: Analytic methods commonly used in epidemiology do not account for spatial correlation between observations. In regression analyses, omission of that autocorrelation can bias parameter estimates and yield incorrect standard error estimates.Entities:
Mesh:
Year: 2011 PMID: 21961693 PMCID: PMC3191333 DOI: 10.1186/1471-2288-11-133
Source DB: PubMed Journal: BMC Med Res Methodol ISSN: 1471-2288 Impact factor: 4.615
Figure 1Geographic boundaries of wards (bold polygons), and cities (gray polygons) and rural agglomerations within wards, in Mazandaran and Golestan provinces.
Figure 2Observed spatial pattern (a), and neighbourhood-based spatial Poisson generalized linear mixed model adjusted spatial pattern of esophageal cancer SIRs (b).
Socio-economic loadings from factor analysis (Income, Urbanisation and Literacy)*
| Rotated Component Matrix | |||
|---|---|---|---|
| Annual income per family | .846 | - | - |
| Annual expenditure on food per family | .654 | .165 | - |
| Annual expenditure on fruit and vegetables per family | .455 | .151 | - |
| Population density | - | .285 | - |
| Relative level of activity | .318 | .221 | .533 |
| % of male unemployment | -.321 | -.679 | - |
| % of employment in agriculture | -.213 | -.808 | - |
| % of employment in industry | .199 | .341 | - |
| % of employment in construction | -.208 | - | .470 |
| % of employment in services | .189 | .824 | -.198 |
| Female illiteracy | - | - | -.642 |
| Male illiteracy | - | - | -.669 |
| * Loadings less than 0.10 in absolute value are not displayed | |||
Figure 3Empirical semivariogram and theoretical semivariogram values (a), and Gaussian semivariogram fit to the empirical semivariograms points (b).
Comparison of distance-based autocorrelation structures for Poisson GLMM regression using exponential, Gaussian and spherical functions
| Model | Parameter | Goodness of fit method | ||||
|---|---|---|---|---|---|---|
| Nugget | Partial sill | Range | -2Log- Likelihood | AIC | BIC | |
| Exponential distance-based | 0.38 | 3.20 | 427.7 | 380.9 | 390.9 | 392.9 |
| Gaussian distance-based | 0.45 | 1.21 | 224.6 | 373.4 | 370.5 | 362.1 |
| Spherical distance-based | 0.40 | 1.65 | 380.5 | 381.5 | 387.5 | 386.5 |
Comparison of Poisson regression goodness of fit using nonspatial generalized linear mixed model and spatial Poisson generalized linear mixed models with either neighbourhood based or distance based autocorrelation structures
| Model | Goodness of fit method | |||
|---|---|---|---|---|
| -2Log- Likelihood | AIC | BIC | Adjusted pseudo R2 | |
| Nonspatial GLMM | 413.5 | 388.5 | 401.5 | 18.7% |
| Neighbourhood-based GLMM | 353.0 | 347.1 | 357.0 | 24.7% |
| Distance-based GLMM | 373.4 | 370.5 | 362.1 | 21.2% |
Figure 4Scatter plots of observed SIRs (horizontal axis) against model predicted SIRs (vertical axis).
Comparison of Poisson regression results using nonspatial GLMM and spatial GLMMs with neighbourhood based or distance based autocorrelation structure
| Nonspatial GLMM | Neighbourhood-based GLMM | Distance-based GLMM | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Literacy | 1.00 | 0.11 | 0.90 | 1.11 | 0.99 | 0.88 | 0.21 | 0.58 | 1.33 | 0.21 | 0.93 | 0.25 | 0.57 | 1.52 | 0.39 |
| Income | 0.83 | 0.22 | 0.67 | 1.03 | 0.20 | 0.67 | 0.29 | 0.50 | 0.89 | 0.04 | 0.74 | 0.23 | 0.59 | 0.93 | 0.06 |
| Urbanisation | 0.78 | 0.19 | 0.65 | 0.94 | 0.08 | 0.55 | 0.35 | 0.39 | 0.77 | 0.05 | 0.70 | 0.22 | 0.56 | 0.87 | 0.05 |
* Standard error of RR