Literature DB >> 21958711

Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis.

Chu-Yu Ye1, Ting Li, Gerald A Tuskan, Timothy J Tschaplinski, Xiaohan Yang.   

Abstract

Glycosyltransferase family14 (GT14) belongs to the glycosyltransferase (GT) superfamily that plays important roles in the biosynthesis of cell walls, the most abundant source of cellulosic biomass for bioethanol production. It has been hypothesized that DUF266 proteins are a new class of GTs related to GT14. In this study, we identified 62 GT14 and 106 DUF266 genes (named GT14-like herein) in Arabidopsis, Oryza, Populus, Sorghum and Vitis. Our phylogenetic analysis separated GT14 and GT14-like genes into two distinct clades, which were further divided into eight and five groups, respectively. Similarities in protein domain, 3D structure and gene expression were uncovered between the two phylogenetic clades, supporting the hypothesis that GT14 and GT14-like genes belong to one family. Therefore, we proposed a new family name, GT14/GT14-like family that combines both subfamilies. Variation in gene expression and protein subcellular localization within the GT14-like subfamily were greater than those within the GT14 subfamily. One-half of the Arabidopsis and Populus GT14/GT14-like genes were found to be preferentially expressed in stem/xylem, indicating that they are likely involved in cell wall biosynthesis. This study provided new insights into the evolution and functional diversification of the GT14/GT14-like family genes.
Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

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Year:  2011        PMID: 21958711     DOI: 10.1016/j.plantsci.2011.01.021

Source DB:  PubMed          Journal:  Plant Sci        ISSN: 0168-9452            Impact factor:   4.729


  10 in total

1.  A 22-bp deletion in OsPLS3 gene encoding a DUF266-containing protein is implicated in rice leaf senescence.

Authors:  Kunyu Li; Yaodong Chen; Yanmin Luo; Fudeng Huang; Chaoyue Zhao; Fangmin Cheng; Xun Xiang; Gang Pan
Journal:  Plant Mol Biol       Date:  2018-08-16       Impact factor: 4.076

2.  Plant Glycosyltransferases Beyond CAZy: A Perspective on DUF Families.

Authors:  Sara Fasmer Hansen; Jesper Harholt; Ai Oikawa; Henrik V Scheller
Journal:  Front Plant Sci       Date:  2012-03-28       Impact factor: 5.753

Review 3.  Cell wall O-glycoproteins and N-glycoproteins: aspects of biosynthesis and function.

Authors:  Eric Nguema-Ona; Maïté Vicré-Gibouin; Maxime Gotté; Barbara Plancot; Patrice Lerouge; Muriel Bardor; Azeddine Driouich
Journal:  Front Plant Sci       Date:  2014-10-02       Impact factor: 5.753

4.  Overexpression of a Domain of Unknown Function 266-containing protein results in high cellulose content, reduced recalcitrance, and enhanced plant growth in the bioenergy crop Populus.

Authors:  Yongil Yang; Chang Geun Yoo; Hao-Bo Guo; William Rottmann; Kimberly A Winkeler; Cassandra M Collins; Lee E Gunter; Sara S Jawdy; Xiaohan Yang; Hong Guo; Yunqiao Pu; Arthur J Ragauskas; Gerald A Tuskan; Jin-Gui Chen
Journal:  Biotechnol Biofuels       Date:  2017-03-23       Impact factor: 6.040

5.  Elucidating the roles of three β-glucuronosyltransferases (GLCATs) acting on arabinogalactan-proteins using a CRISPR-Cas9 multiplexing approach in Arabidopsis.

Authors:  Yuan Zhang; Michael A Held; Allan M Showalter
Journal:  BMC Plant Biol       Date:  2020-05-18       Impact factor: 4.215

6.  Arabinogalactan-proteins of Zostera marina L. contain unique glycan structures and provide insight into adaption processes to saline environments.

Authors:  Lukas Pfeifer; Thomas Shafee; Kim L Johnson; Antony Bacic; Birgit Classen
Journal:  Sci Rep       Date:  2020-05-19       Impact factor: 4.379

7.  Systems identification and characterization of β-glucuronosyltransferase genes involved in arabinogalactan-protein biosynthesis in plant genomes.

Authors:  Oyeyemi Olugbenga Ajayi; Allan M Showalter
Journal:  Sci Rep       Date:  2020-11-25       Impact factor: 4.379

8.  Two β-glucuronosyltransferases involved in the biosynthesis of type II arabinogalactans function in mucilage polysaccharide matrix organization in Arabidopsis thaliana.

Authors:  Oyeyemi O Ajayi; Michael A Held; Allan M Showalter
Journal:  BMC Plant Biol       Date:  2021-05-29       Impact factor: 4.215

9.  Three β-Glucuronosyltransferase Genes Involved in Arabinogalactan Biosynthesis Function in Arabidopsis Growth and Development.

Authors:  Oyeyemi O Ajayi; Michael A Held; Allan M Showalter
Journal:  Plants (Basel)       Date:  2021-06-09

10.  Calcium Binding by Arabinogalactan Polysaccharides Is Important for Normal Plant Development.

Authors:  Federico Lopez-Hernandez; Theodora Tryfona; Annalisa Rizza; Xiaolan L Yu; Matthew O B Harris; Alex A R Webb; Toshihisa Kotake; Paul Dupree
Journal:  Plant Cell       Date:  2020-08-06       Impact factor: 11.277

  10 in total

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