Literature DB >> 21954444

HRE-type genes are regulated by growth-related changes in internal oxygen concentrations during the normal development of potato (Solanum tuberosum) tubers.

Francesco Licausi1, Federico Manuel Giorgi, Elmar Schmälzlin, Björn Usadel, Pierdomenico Perata, Joost Thomas van Dongen, Peter Geigenberger.   

Abstract

The occurrence of hypoxic conditions in plants not only represents a stress condition but is also associated with the normal development and growth of many organs, leading to adaptive changes in metabolism and growth to prevent internal anoxia. Internal oxygen concentrations decrease inside growing potato tubers, due to their active metabolism and increased resistance to gas diffusion as tubers grow. In the present work, we identified three hypoxia-responsive ERF (StHRE) genes whose expression is regulated by the gradual decrease in oxygen tensions that occur when potato tubers grow larger. Increasing the external oxygen concentration counteracted the modification of StHRE expression during tuber growth, supporting the idea that the actual oxygen levels inside the organs, rather than development itself, are responsible for the regulation of StHRE genes. We identified several sugar metabolism-related genes co-regulated with StHRE genes during tuber development and possibly involved in starch accumulation. All together, our data suggest a possible role for low oxygen in the regulation of sugar metabolism in the potato tuber, similar to what happens in storage tissues during seed development.

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Year:  2011        PMID: 21954444     DOI: 10.1093/pcp/pcr128

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  7 in total

Review 1.  Oxygen Sensing and Integrative Stress Signaling in Plants.

Authors:  Romy R Schmidt; Daan A Weits; Claudio F J Feulner; Joost T van Dongen
Journal:  Plant Physiol       Date:  2017-11-21       Impact factor: 8.340

2.  Oxygen Sensing via the Ethylene Response Transcription Factor RAP2.12 Affects Plant Metabolism and Performance under Both Normoxia and Hypoxia.

Authors:  Melanie Verena Paul; Srignanakshi Iyer; Carmen Amerhauser; Martin Lehmann; Joost T van Dongen; Peter Geigenberger
Journal:  Plant Physiol       Date:  2016-07-02       Impact factor: 8.340

3.  Reverse engineering: a key component of systems biology to unravel global abiotic stress cross-talk.

Authors:  Swetlana Friedel; Björn Usadel; Nicolaus von Wirén; Nese Sreenivasulu
Journal:  Front Plant Sci       Date:  2012-12-31       Impact factor: 5.753

4.  ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information.

Authors:  Alexander Lachmann; Federico M Giorgi; Gonzalo Lopez; Andrea Califano
Journal:  Bioinformatics       Date:  2016-04-23       Impact factor: 6.937

5.  Functional Balancing of the Hypoxia Regulators RAP2.12 and HRA1 Takes Place in vivo in Arabidopsis thaliana Plants.

Authors:  Beatrice Giuntoli; Francesco Licausi; Hans van Veen; Pierdomenico Perata
Journal:  Front Plant Sci       Date:  2017-04-25       Impact factor: 5.753

6.  Accelerated parallel algorithm for gene network reverse engineering.

Authors:  Jing He; Zhou Zhou; Michael Reed; Andrea Califano
Journal:  BMC Syst Biol       Date:  2017-09-21

Review 7.  Optical oxygen micro- and nanosensors for plant applications.

Authors:  Cindy Ast; Elmar Schmälzlin; Hans-Gerd Löhmannsröben; Joost T van Dongen
Journal:  Sensors (Basel)       Date:  2012-05-25       Impact factor: 3.576

  7 in total

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