Literature DB >> 21952547

Genome sequence of the marine photoheterotrophic bacterium Erythrobacter sp. strain NAP1.

Michal Koblízek1, Jan Janouskovec, Miroslav Oborník, Justin H Johnson, Steven Ferriera, Paul G Falkowski.   

Abstract

Here we report the full genome sequence of marine phototrophic bacterium Erythrobacter sp. strain NAP1. The 3.3-Mb genome contains a full set of photosynthetic genes organized in one 38.9-kb cluster; however, it does not contain genes for CO(2) or N(2) fixation, thereby confirming that the organism is a photoheterotroph.

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Year:  2011        PMID： 21952547      PMCID： PMC3187229          DOI： 10.1128/JB.05845-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  Contribution of aerobic photoheterotrophic bacteria to the carbon cycle in the ocean.

Authors:  Z S Kolber; F G Plumley; A S Lang; J T Beatty; R E Blankenship; C L VanDover; C Vetriani; M Koblizek; C Rathgeber; P G Falkowski
Journal:  Science       Date:  2001-06-29       Impact factor: 47.728

2.  Bacterial photosynthesis in surface waters of the open ocean.

Authors:  Z S Kolber; C L Van Dover; R A Niederman; P G Falkowski
Journal:  Nature       Date:  2000-09-14       Impact factor: 49.962

3.  Distribution of aerobic bacteria which contain bacteriochlorophyll a.

Authors:  T Shiba; U Simidu; N Taga
Journal:  Appl Environ Microbiol       Date:  1979-07       Impact factor: 4.792

4.  A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes.

Authors:  Susanne M D Goldberg; Justin Johnson; Dana Busam; Tamara Feldblyum; Steve Ferriera; Robert Friedman; Aaron Halpern; Hoda Khouri; Saul A Kravitz; Federico M Lauro; Kelvin Li; Yu-Hui Rogers; Robert Strausberg; Granger Sutton; Luke Tallon; Torsten Thomas; Eli Venter; Marvin Frazier; J Craig Venter
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-13       Impact factor: 11.205

5.  On the photosynthetic properties of marine bacterium COL2P belonging to Roseobacter clade.

Authors:  Michal Koblízek; Jarmila Mlcousková; Zbigniew Kolber; Jirí Kopecký
Journal:  Arch Microbiol       Date:  2009-12-01       Impact factor: 2.552

6.  Isolation and characterization of Erythrobacter sp. strains from the upper ocean.

Authors:  Michal Koblízek; Oded Béjà; Robert R Bidigare; Stephanie Christensen; Bryan Benitez-Nelson; Costantino Vetriani; Marcin K Kolber; Paul G Falkowski; Zbigniew S Kolber
Journal:  Arch Microbiol       Date:  2003-09-23       Impact factor: 2.552

7.  Complete genome sequence of Erythrobacter litoralis HTCC2594.

Authors:  Hyun-Myung Oh; Stephen J Giovannoni; Steve Ferriera; Justin Johnson; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2009-01-23       Impact factor: 3.490
  7 in total
  11 in total

1.  The variability of light-harvesting complexes in aerobic anoxygenic phototrophs.

Authors:  Vadim Selyanin; Dzmitry Hauruseu; Michal Koblížek
Journal:  Photosynth Res       Date:  2015-10-19       Impact factor: 3.573

2.  Genome Reconstruction from Metagenomic Data Sets Reveals Novel Microbes in the Brackish Waters of the Caspian Sea.

Authors:  Maliheh Mehrshad; Mohammad Ali Amoozegar; Rohit Ghai; Seyed Abolhassan Shahzadeh Fazeli; Francisco Rodriguez-Valera
Journal:  Appl Environ Microbiol       Date:  2016-01-04       Impact factor: 4.792

3.  Influence of light on carbon utilization in aerobic anoxygenic phototrophs.

Authors:  Dzmitry Hauruseu; Michal Koblížek
Journal:  Appl Environ Microbiol       Date:  2012-08-10       Impact factor: 4.792

4.  Regulation of the Erythrobacter litoralis DSM 8509 general stress response by visible light.

Authors:  Aretha Fiebig; Lydia M Varesio; Xiomarie Alejandro Navarreto; Sean Crosson
Journal:  Mol Microbiol       Date:  2019-06-07       Impact factor: 3.501

5.  Erythrobacter aureus sp. nov., a plant growth-promoting bacterium isolated from sediment in the Yellow Sea, China.

Authors:  Tongtong Tang; Xing Sun; Yuanhua Dong; Qin Liu
Journal:  3 Biotech       Date:  2019-10-31       Impact factor: 2.406

6.  A New Niche for Anoxygenic Phototrophs as Endoliths.

Authors:  Daniel Roush; Estelle Couradeau; Brandon Guida; Susanne Neuer; Ferran Garcia-Pichel
Journal:  Appl Environ Microbiol       Date:  2018-01-31       Impact factor: 4.792

7.  A Comparison of 14 Erythrobacter Genomes Provides Insights into the Genomic Divergence and Scattered Distribution of Phototrophs.

Authors:  Qiang Zheng; Wenxin Lin; Yanting Liu; Chang Chen; Nianzhi Jiao
Journal:  Front Microbiol       Date:  2016-06-24       Impact factor: 5.640

8.  Diversity and Distribution of Freshwater Aerobic Anoxygenic Phototrophic Bacteria across a Wide Latitudinal Gradient.

Authors:  Isabel Ferrera; Hugo Sarmento; John C Priscu; Amy Chiuchiolo; José M González; Hans-Peter Grossart
Journal:  Front Microbiol       Date:  2017-02-22       Impact factor: 5.640

9.  Complete Genome Sequence of the Marine Carbazole-Degrading Bacterium Erythrobacter sp. Strain KY5.

Authors:  Felipe Vejarano; Chiho Suzuki-Minakuchi; Yoshiyuki Ohtsubo; Masataka Tsuda; Kazunori Okada; Hideaki Nojiri
Journal:  Microbiol Resour Announc       Date:  2018-08-30

10.  Draft Genome Sequences of Two Marine Phototrophic Bacteria, Erythrobacter longus Strain DSM 6997 and Erythrobacter litoralis Strain DSM 8509.

Authors:  Yu Wang; Rui Zhang; Qiang Zheng; Nianzhi Jiao
Journal:  Genome Announc       Date:  2014-07-24
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