Literature DB >> 21948844

Nostophycin biosynthesis is directed by a hybrid polyketide synthase-nonribosomal peptide synthetase in the toxic cyanobacterium Nostoc sp. strain 152.

David P Fewer1, Julia Osterholm, Leo Rouhiainen, Jouni Jokela, Matti Wahlsten, Kaarina Sivonen.   

Abstract

Cyanobacteria are a rich source of natural products with interesting pharmaceutical properties. Here, we report the identification, sequencing, annotation, and biochemical analysis of the nostophycin (npn) biosynthetic gene cluster. The npn gene cluster spans 45.1 kb and consists of three open reading frames encoding a polyketide synthase, a mixed polyketide nonribosomal peptide synthetase, and a nonribosomal peptide synthetase. The genetic architecture and catalytic domain organization of the proteins are colinear in arrangement, with the putative order of the biosynthetic assembly of the cyclic heptapeptide. NpnB contains an embedded monooxygenase domain linking nonribosomal peptide synthetase (NRPS) and polyketide synthase (PKS) catalytic domains and predicted here to hydroxylate the nostophycin during assembly. Expression of the adenylation domains and subsequent substrate specificity assays support the involvement of this cluster in nostophycin biosynthesis. Biochemical analyses suggest that the loading substrate of NpnA is likely to be a phenylpropanoic acid necessitating deletion of a carbon atom to explain the biosynthesis of nostophycin. Biosyntheses of nostophycin and microcystin resemble each other, but the phylogenetic analyses suggest that they are distantly related to one another.

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Year:  2011        PMID: 21948844      PMCID: PMC3208980          DOI: 10.1128/AEM.05993-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  22 in total

1.  Modular Peptide Synthetases Involved in Nonribosomal Peptide Synthesis.

Authors:  Mohamed A. Marahiel; Torsten Stachelhaus; Henning D. Mootz
Journal:  Chem Rev       Date:  1997-11-10       Impact factor: 60.622

2.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

3.  Biosynthetic characterization and chemoenzymatic assembly of the cryptophycins. Potent anticancer agents from cyanobionts.

Authors:  Nathan A Magarvey; Zachary Q Beck; Trimurtulu Golakoti; Yousong Ding; Udo Huber; Thomas K Hemscheidt; Dafna Abelson; Richard E Moore; David H Sherman
Journal:  ACS Chem Biol       Date:  2006-12-15       Impact factor: 5.100

4.  The barbamide biosynthetic gene cluster: a novel marine cyanobacterial system of mixed polyketide synthase (PKS)-non-ribosomal peptide synthetase (NRPS) origin involving an unusual trichloroleucyl starter unit.

Authors:  Zunxue Chang; Patricia Flatt; William H Gerwick; Viet-Anh Nguyen; Christine L Willis; David H Sherman
Journal:  Gene       Date:  2002-08-21       Impact factor: 3.688

Review 5.  Cyanobactins-ribosomal cyclic peptides produced by cyanobacteria.

Authors:  Kaarina Sivonen; Niina Leikoski; David P Fewer; Jouni Jokela
Journal:  Appl Microbiol Biotechnol       Date:  2010-02-27       Impact factor: 4.813

6.  Sequence analysis and biochemical characterization of the nostopeptolide A biosynthetic gene cluster from Nostoc sp. GSV224.

Authors:  Dietmar Hoffmann; Joan M Hevel; Richard E Moore; Bradley S Moore
Journal:  Gene       Date:  2003-06-05       Impact factor: 3.688

7.  The non-ribosomal assembly and frequent occurrence of the protease inhibitors spumigins in the bloom-forming cyanobacterium Nodularia spumigena.

Authors:  David P Fewer; Jouni Jokela; Leo Rouhiainen; Matti Wahlsten; Kerttu Koskenniemi; Lucas J Stal; Kaarina Sivonen
Journal:  Mol Microbiol       Date:  2009-08-19       Impact factor: 3.501

8.  Cloning and biochemical characterization of the hectochlorin biosynthetic gene cluster from the marine cyanobacterium Lyngbya majuscula.

Authors:  Aishwarya V Ramaswamy; Carla M Sorrels; William H Gerwick
Journal:  J Nat Prod       Date:  2007-11-15       Impact factor: 4.050

9.  Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs).

Authors:  Christian Rausch; Tilmann Weber; Oliver Kohlbacher; Wolfgang Wohlleben; Daniel H Huson
Journal:  Nucleic Acids Res       Date:  2005-10-12       Impact factor: 16.971

10.  Halogenase genes in nonribosomal peptide synthetase gene clusters of Microcystis (cyanobacteria): sporadic distribution and evolution.

Authors:  Sabrina Cadel-Six; Catherine Dauga; Anne Marie Castets; Rosmarie Rippka; Christiane Bouchier; Nicole Tandeau de Marsac; Martin Welker
Journal:  Mol Biol Evol       Date:  2008-07-08       Impact factor: 16.240

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  11 in total

1.  A Novel Chemoenzymatic Approach to Produce Cilengitide Using the Thioesterase Domain from Microcystis aeruginosa Microcystin Synthetase C.

Authors:  Longliang Qiao; Jian Fang; Peng Zhu; Hailong Huang; Chenyang Dang; Jianhu Pang; Weifang Gao; Xiaoting Qiu; Lili Huang; Yanrong Li
Journal:  Protein J       Date:  2019-12       Impact factor: 2.371

2.  Biosynthesis of Athmu, a α,γ-hydroxy-β-amino acid of pahayokolides A-B.

Authors:  Li Liu; Daniel W Bearden; Juan C Rodriguez; Kathleen S Rein
Journal:  Tetrahedron Lett       Date:  2012-12-12       Impact factor: 2.415

Review 3.  Heterologous production of cyanobacterial compounds.

Authors:  Dipesh Dhakal; Manyun Chen; Hendrik Luesch; Yousong Ding
Journal:  J Ind Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.258

4.  The Swinholide Biosynthesis Gene Cluster from a Terrestrial Cyanobacterium, Nostoc sp. Strain UHCC 0450.

Authors:  Anu Humisto; Jouni Jokela; Liwei Liu; Matti Wahlsten; Hao Wang; Perttu Permi; João Paulo Machado; Agostinho Antunes; David P Fewer; Kaarina Sivonen
Journal:  Appl Environ Microbiol       Date:  2018-01-17       Impact factor: 4.792

Review 5.  Bioactive Peptides Produced by Cyanobacteria of the Genus Nostoc: A Review.

Authors:  Anna Fidor; Robert Konkel; Hanna Mazur-Marzec
Journal:  Mar Drugs       Date:  2019-09-29       Impact factor: 5.118

6.  Culturable Endophytes Diversity Isolated from Paeonia ostii and the Genetic Basis for Their Bioactivity.

Authors:  Rui-Xian Yang; Shao-Wen Zhang; Dong Xue; Jun-Hao Xuan; Yuan-Bo Zhang; Biao-Biao Peng
Journal:  Pol J Microbiol       Date:  2018

7.  A Unique Tryptophan C-Prenyltransferase from the Kawaguchipeptin Biosynthetic Pathway.

Authors:  Anirudra Parajuli; Daniel H Kwak; Luca Dalponte; Niina Leikoski; Tomas Galica; Ugochukwu Umeobika; Laurent Trembleau; Andrew Bent; Kaarina Sivonen; Matti Wahlsten; Hao Wang; Ermanno Rizzi; Gianluca De Bellis; James Naismith; Marcel Jaspars; Xinyu Liu; Wael Houssen; David Peter Fewer
Journal:  Angew Chem Int Ed Engl       Date:  2016-02-05       Impact factor: 15.336

8.  A hybrid NRPS-PKS gene cluster related to the bleomycin family of antitumor antibiotics in Alteromonas macleodii strains.

Authors:  Carolina Megumi Mizuno; Nikole E Kimes; Mario López-Pérez; Eva Ausó; Francisco Rodriguez-Valera; Rohit Ghai
Journal:  PLoS One       Date:  2013-09-19       Impact factor: 3.240

9.  Genome mining for natural product biosynthetic gene clusters in the Subsection V cyanobacteria.

Authors:  Melinda L Micallef; Paul M D'Agostino; Deepti Sharma; Rajesh Viswanathan; Michelle C Moffitt
Journal:  BMC Genomics       Date:  2015-09-03       Impact factor: 3.969

10.  Diversity of Natural Product Biosynthetic Genes in the Microbiome of the Deep Sea Sponges Inflatella pellicula, Poecillastra compressa, and Stelletta normani.

Authors:  Erik Borchert; Stephen A Jackson; Fergal O'Gara; Alan D W Dobson
Journal:  Front Microbiol       Date:  2016-06-29       Impact factor: 5.640

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