Literature DB >> 21943902

The use of continuous culture in systems biology investigations.

Catherine L Winder1, Karin Lanthaler.   

Abstract

When acquiring data for systems biology studies, it is essential to perform the experiments in controlled and reproducible conditions. Advances in the fields of proteomics and metabolomics allow the quantitative analysis of the components of the biological cell. It is essential to include a method in the experimental pipeline to culture the biological system in controlled and reproducible conditions to facilitate the acquisition of high-quality data. The employment of continuous culture methods for the growth of microorganisms is an ideal tool to achieve these objectives. This chapter will review the continuous culture approaches which may be applied in such studies, outline the experimental options which should be considered, and describe the approach applied in the production of steady-state cultures of Saccharomyces cerevisiae.
Copyright © 2011 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21943902     DOI: 10.1016/B978-0-12-385118-5.00014-1

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  6 in total

1.  Anaerobic α-amylase production and secretion with fumarate as the final electron acceptor in Saccharomyces cerevisiae.

Authors:  Zihe Liu; Tobias Österlund; Jin Hou; Dina Petranovic; Jens Nielsen
Journal:  Appl Environ Microbiol       Date:  2013-02-22       Impact factor: 4.792

2.  Yeast grown in continuous culture systems can detect mutagens with improved sensitivity relative to the Ames test.

Authors:  Joseph Y Ong; Julia T Pence; David C Molik; Heather A M Shepherd; Holly V Goodson
Journal:  PLoS One       Date:  2021-03-17       Impact factor: 3.240

3.  Improving metabolic flux predictions using absolute gene expression data.

Authors:  Dave Lee; Kieran Smallbone; Warwick B Dunn; Ettore Murabito; Catherine L Winder; Douglas B Kell; Pedro Mendes; Neil Swainston
Journal:  BMC Syst Biol       Date:  2012-06-19

4.  A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes.

Authors:  Kieran Smallbone; Hanan L Messiha; Kathleen M Carroll; Catherine L Winder; Naglis Malys; Warwick B Dunn; Ettore Murabito; Neil Swainston; Joseph O Dada; Farid Khan; Pınar Pir; Evangelos Simeonidis; Irena Spasić; Jill Wishart; Dieter Weichart; Neil W Hayes; Daniel Jameson; David S Broomhead; Stephen G Oliver; Simon J Gaskell; John E G McCarthy; Norman W Paton; Hans V Westerhoff; Douglas B Kell; Pedro Mendes
Journal:  FEBS Lett       Date:  2013-07-04       Impact factor: 4.124

5.  A Small-Volume, Low-Cost, and Versatile Continuous Culture Device.

Authors:  Dominick Matteau; Vincent Baby; Stéphane Pelletier; Sébastien Rodrigue
Journal:  PLoS One       Date:  2015-07-21       Impact factor: 3.240

Review 6.  The Intestinal Microbiota May Be a Potential Theranostic Tool for Personalized Medicine.

Authors:  Marina Di Domenico; Andrea Ballini; Mariarosaria Boccellino; Salvatore Scacco; Roberto Lovero; Ioannis Alexandros Charitos; Luigi Santacroce
Journal:  J Pers Med       Date:  2022-03-24
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.