Literature DB >> 21941128

The nucleolar protein Nop19p interacts preferentially with Utp25p and Dhr2p and is essential for the production of the 40S ribosomal subunit in Saccharomyces cerevisiae.

Elodie Choque1, Marlène Marcellin, Odile Burlet-Schiltz, Olivier Gadal, Christophe Dez.   

Abstract

In eukaryotes, ribosome biogenesis is a process of major interest that requires more than 200 factors acting coordinately in time and space. Using genetic and proteomic studies, most of the components have now been identified. Based on its nucleolar localization, we characterized the protein encoded by the open reading frame YGR251W, we renamed Nop19p as playing an essential role in ribosome biogenesis. Depletion of the Nop19p in yeast impairs pre-rRNA processing at sites A₀, A₁ and A₂, leading to a strong decrease in 18S rRNA and 40S subunit levels. Nop19p is a component of 90S preribosomes which assembly is believed to result from stepwise incorporation of UTP modules. We show that Nop19p depletion does not impair the incorporation of UTP subcomplexes on preribosomes and conversely that depletion of UTP subcomplexes does not affect Nop19p recruitment on 90S preribosomes. TAP experiments under stringent conditions revealed that Nop19p interacts preferentially with the DEAH-box RNA helicase Dhr2p and Utp25p, both required for A 0, A 1 and A 2 cleavages. Nop19p appeared essential for the incorporation of Utp25p in preribosomes. In addition, our results suggest that in absence of Nop19p, Dhr2p remains trapped within aberrant preribosomes.

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Year:  2011        PMID: 21941128      PMCID: PMC3256425          DOI: 10.4161/rna.8.6.17699

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  46 in total

1.  A generic protein purification method for protein complex characterization and proteome exploration.

Authors:  G Rigaut; A Shevchenko; B Rutz; M Wilm; M Mann; B Séraphin
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2.  Npa1p, a component of very early pre-60S ribosomal particles, associates with a subset of small nucleolar RNPs required for peptidyl transferase center modification.

Authors:  Christophe Dez; Carine Froment; Jacqueline Noaillac-Depeyre; Bernard Monsarrat; Michèle Caizergues-Ferrer; Yves Henry
Journal:  Mol Cell Biol       Date:  2004-07       Impact factor: 4.272

3.  Functional characterization of Pwp2, a WD family protein essential for the assembly of the 90 S pre-ribosomal particle.

Authors:  Mercedes Dosil; Xosé R Bustelo
Journal:  J Biol Chem       Date:  2004-06-30       Impact factor: 5.157

4.  Cbf5p, the putative pseudouridine synthase of H/ACA-type snoRNPs, can form a complex with Gar1p and Nop10p in absence of Nhp2p and box H/ACA snoRNAs.

Authors:  Anthony K Henras; Regine Capeyrou; Yves Henry; Michele Caizergues-Ferrer
Journal:  RNA       Date:  2004-09-23       Impact factor: 4.942

Review 5.  Ribosome synthesis meets the cell cycle.

Authors:  Christophe Dez; David Tollervey
Journal:  Curr Opin Microbiol       Date:  2004-12       Impact factor: 7.934

6.  RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components.

Authors:  Jennifer E G Gallagher; David A Dunbar; Sander Granneman; Brianna M Mitchell; Yvonne Osheim; Ann L Beyer; Susan J Baserga
Journal:  Genes Dev       Date:  2004-10-15       Impact factor: 11.361

7.  Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.

Authors:  M S Longtine; A McKenzie; D J Demarini; N G Shah; A Wach; A Brachat; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

8.  Temperature-sensitive mutations demonstrate roles for yeast fibrillarin in pre-rRNA processing, pre-rRNA methylation, and ribosome assembly.

Authors:  D Tollervey; H Lehtonen; R Jansen; H Kern; E C Hurt
Journal:  Cell       Date:  1993-02-12       Impact factor: 41.582

9.  Has1p, a member of the DEAD-box family, is required for 40S ribosomal subunit biogenesis in Saccharomyces cerevisiae.

Authors:  Bertrand Emery; Jesús de la Cruz; Sanda Rocak; Olivier Deloche; Patrick Linder
Journal:  Mol Microbiol       Date:  2004-04       Impact factor: 3.501

10.  Identification and functional analysis of two U3 binding sites on yeast pre-ribosomal RNA.

Authors:  M Beltrame; D Tollervey
Journal:  EMBO J       Date:  1992-04       Impact factor: 11.598

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  3 in total

Review 1.  DExD/H-box RNA helicases in ribosome biogenesis.

Authors:  Roman Martin; Annika U Straub; Carmen Doebele; Markus T Bohnsack
Journal:  RNA Biol       Date:  2012-08-24       Impact factor: 4.652

Review 2.  RNA folding and functions of RNA helicases in ribosome biogenesis.

Authors:  Valentin Mitterer; Brigitte Pertschy
Journal:  RNA Biol       Date:  2022-01       Impact factor: 4.766

3.  Turnover of aberrant pre-40S pre-ribosomal particles is initiated by a novel endonucleolytic decay pathway.

Authors:  Elodie Choque; Claudia Schneider; Olivier Gadal; Christophe Dez
Journal:  Nucleic Acids Res       Date:  2018-05-18       Impact factor: 16.971

  3 in total

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