Literature DB >> 21938335

Key concepts to assess the readiness of data for international research: data quality, lineage and provenance, extraction and processing errors, traceability, and curation. Contribution of the IMIA Primary Health Care Informatics Working Group.

S de Lusignan1, S-T Liaw, P Krause, V Curcin, M Tristan Vicente, G Michalakidis, L Agreus, P Leysen, N Shaw, K Mendis.   

Abstract

OBJECTIVE: To define the key concepts which inform whether a system for collecting, aggregating and processing routine clinical data for research is fit for purpose.
METHODS: Literature review and shared experiential learning from research using routinely collected data. We excluded socio-cultural issues, and privacy and security issues as our focus was to explore linking clinical data.
RESULTS: Six key concepts describe data: (1) DATA QUALITY: the core Overarching concept - Are these data fit for purpose? (2) Data provenance: defined as how data came to be; incorporating the concepts of lineage and pedigree. Mapping this process requires metadata. New variables derived during data analysis have their own provenance. (3) Data extraction errors and (4) Data processing errors, which are the responsibility of the investigator extracting the data but need quantifying. (5) Traceability: the capability to identify the origins of any data cell within the final analysis table essential for good governance, and almost impossible without a formal system of metadata; and (6) Curation: storing data and look-up tables in a way that allows future researchers to carry out further research or review earlier findings.
CONCLUSION: There are common distinct steps in processing data; the quality of any metadata may be predictive of the quality of the process. Outputs based on routine data should include a review of the process from data origin to curation and publish information about their data provenance and processing method.

Mesh:

Year:  2011        PMID: 21938335

Source DB:  PubMed          Journal:  Yearb Med Inform        ISSN: 0943-4747


  11 in total

1.  Data quality and fitness for purpose of routinely collected data--a general practice case study from an electronic practice-based research network (ePBRN).

Authors:  Siaw-Teng Liaw; Jane Taggart; Sarah Dennis; Anthony Yeo
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  Measuring Quality of Healthcare Outcomes in Type 2 Diabetes from Routine Data: a Seven-nation Survey Conducted by the IMIA Primary Health Care Working Group.

Authors:  W Hinton; H Liyanage; A McGovern; S-T Liaw; C Kuziemsky; N Munro; S de Lusignan
Journal:  Yearb Med Inform       Date:  2017-09-11

3.  Caveats for the use of operational electronic health record data in comparative effectiveness research.

Authors:  William R Hersh; Mark G Weiner; Peter J Embi; Judith R Logan; Philip R O Payne; Elmer V Bernstam; Harold P Lehmann; George Hripcsak; Timothy H Hartzog; James J Cimino; Joel H Saltz
Journal:  Med Care       Date:  2013-08       Impact factor: 2.983

4.  A Conceptual Framework of Data Readiness: The Contextual Intersection of Quality, Availability, Interoperability, and Provenance.

Authors:  Brian J Douthit; Guilherme Del Fiol; Catherine J Staes; Sharron L Docherty; Rachel L Richesson
Journal:  Appl Clin Inform       Date:  2021-07-21       Impact factor: 2.762

5.  Improving Osteoporosis Management in Primary Care: An Audit of the Impact of a Community Based Fracture Liaison Nurse.

Authors:  Tom Chan; Simon de Lusignan; Alun Cooper; Mary Elliott
Journal:  PLoS One       Date:  2015-08-27       Impact factor: 3.240

6.  Electronic health records and disease registries to support integrated care in a health neighbourhood: an ontology-based methodology.

Authors:  Siaw-Teng Liaw; Jane Taggart; Hairong Yu; Alireza Rahimi
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2014-04-07

7.  Defining dimensions of research readiness: a conceptual model for primary care research networks.

Authors:  Helen Carr; Simon de Lusignan; Harshana Liyanage; Siaw-Teng Liaw; Amanda Terry; Imran Rafi
Journal:  BMC Fam Pract       Date:  2014-11-26       Impact factor: 2.497

8.  Multisite Evaluation of a Data Quality Tool for Patient-Level Clinical Data Sets.

Authors:  Vojtech Huser; Frank J DeFalco; Martijn Schuemie; Patrick B Ryan; Ning Shang; Mark Velez; Rae Woong Park; Richard D Boyce; Jon Duke; Ritu Khare; Levon Utidjian; Charles Bailey
Journal:  EGEMS (Wash DC)       Date:  2016-11-30

9.  A basic model for assessing primary health care electronic medical record data quality.

Authors:  Amanda L Terry; Moira Stewart; Sonny Cejic; J Neil Marshall; Simon de Lusignan; Bert M Chesworth; Vijaya Chevendra; Heather Maddocks; Joshua Shadd; Fred Burge; Amardeep Thind
Journal:  BMC Med Inform Decis Mak       Date:  2019-02-12       Impact factor: 2.796

10.  Cohort profile: the Scottish Research register SHARE. A register of people interested in research participation linked to NHS data sets.

Authors:  Brian McKinstry; Frank M Sullivan; Shobna Vasishta; Roma Armstrong; Janet Hanley; John Haughney; Sam Philip; Blair H Smith; Amanda Wood; Colin N A Palmer
Journal:  BMJ Open       Date:  2017-02-01       Impact factor: 2.692

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