Literature DB >> 21934702

Genomic insights into adaptation to high-altitude environments.

Z A Cheviron1, R T Brumfield.   

Abstract

Elucidating the molecular genetic basis of adaptive traits is a central goal of evolutionary genetics. The cold, hypoxic conditions of high-altitude habitats impose severe metabolic demands on endothermic vertebrates, and understanding how high-altitude endotherms cope with the combined effects of hypoxia and cold can provide important insights into the process of adaptive evolution. The physiological responses to high-altitude stress have been the subject of over a century of research, and recent advances in genomic technologies have opened up exciting opportunities to explore the molecular genetic basis of adaptive physiological traits. Here, we review recent literature on the use of genomic approaches to study adaptation to high-altitude hypoxia in terrestrial vertebrates, and explore opportunities provided by newly developed technologies to address unanswered questions in high-altitude adaptation at a genomic scale.

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Year:  2011        PMID: 21934702      PMCID: PMC3313048          DOI: 10.1038/hdy.2011.85

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  104 in total

1.  Hitchhiking under positive Darwinian selection.

Authors:  J C Fay; C I Wu
Journal:  Genetics       Date:  2000-07       Impact factor: 4.562

2.  Detecting a local signature of genetic hitchhiking along a recombining chromosome.

Authors:  Yuseob Kim; Wolfgang Stephan
Journal:  Genetics       Date:  2002-02       Impact factor: 4.562

Review 3.  Statistical tests of selective neutrality in the age of genomics.

Authors:  R Nielsen
Journal:  Heredity (Edinb)       Date:  2001-06       Impact factor: 3.821

Review 4.  Functional genomics and the comparative physiology of hypoxia.

Authors:  Frank L Powell
Journal:  Annu Rev Physiol       Date:  2002-05-01       Impact factor: 19.318

5.  Detecting recent positive selection in the human genome from haplotype structure.

Authors:  Pardis C Sabeti; David E Reich; John M Higgins; Haninah Z P Levine; Daniel J Richter; Stephen F Schaffner; Stacey B Gabriel; Jill V Platko; Nick J Patterson; Gavin J McDonald; Hans C Ackerman; Sarah J Campbell; David Altshuler; Richard Cooper; Dominic Kwiatkowski; Ryk Ward; Eric S Lander
Journal:  Nature       Date:  2002-10-09       Impact factor: 49.962

6.  Effect of hematocrit on venous return.

Authors:  A C GUYTON; T Q RICHARDSON
Journal:  Circ Res       Date:  1961-01       Impact factor: 17.367

7.  Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation.

Authors:  P Jaakkola; D R Mole; Y M Tian; M I Wilson; J Gielbert; S J Gaskell; A von Kriegsheim; H F Hebestreit; M Mukherji; C J Schofield; P H Maxwell; C W Pugh; P J Ratcliffe
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

8.  A genome-wide departure from the standard neutral model in natural populations of Drosophila.

Authors:  P Andolfatto; M Przeworski
Journal:  Genetics       Date:  2000-09       Impact factor: 4.562

9.  Novel mechanism for high-altitude adaptation in hemoglobin of the Andean frog Telmatobius peruvianus.

Authors:  Roy E Weber; Hrvoj Ostojic; Angela Fago; Sylvia Dewilde; Marie-Louise Van Hauwaert; Luc Moens; Carlos Monge
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2002-11       Impact factor: 3.619

10.  Hypoxia-induced gene expression profiling in the euryoxic fish Gillichthys mirabilis.

Authors:  A Y Gracey; J V Troll; G N Somero
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

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  47 in total

Review 1.  Mitonuclear Ecology.

Authors:  Geoffrey E Hill
Journal:  Mol Biol Evol       Date:  2015-04-29       Impact factor: 16.240

Review 2.  It's more than stamp collecting: how genome sequencing can unify biological research.

Authors:  Stephen Richards
Journal:  Trends Genet       Date:  2015-05-20       Impact factor: 11.639

Review 3.  A review of inter- and intraspecific variation in the eutherian placenta.

Authors:  William E Gundling; Derek E Wildman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-03-05       Impact factor: 6.237

4.  High-altitude shorebird migration in the absence of topographical barriers: avoiding high air temperatures and searching for profitable winds.

Authors:  Nathan R Senner; Maria Stager; Mo A Verhoeven; Zachary A Cheviron; Theunis Piersma; Willem Bouten
Journal:  Proc Biol Sci       Date:  2018-06-27       Impact factor: 5.349

5.  Comparative genomic investigation of high-elevation adaptation in ectothermic snakes.

Authors:  Jia-Tang Li; Yue-Dong Gao; Liang Xie; Cao Deng; Peng Shi; Meng-Long Guan; Song Huang; Jin-Long Ren; Dong-Dong Wu; Li Ding; Zi-Yan Huang; Hu Nie; Devon P Humphreys; David M Hillis; Wen-Zhi Wang; Ya-Ping Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-31       Impact factor: 11.205

6.  Adaptive Modifications of Muscle Phenotype in High-Altitude Deer Mice Are Associated with Evolved Changes in Gene Regulation.

Authors:  Graham R Scott; Todd S Elogio; Mikaela A Lui; Jay F Storz; Zachary A Cheviron
Journal:  Mol Biol Evol       Date:  2015-04-07       Impact factor: 16.240

7.  Genetic diversity and gene flow decline with elevation in montane mayflies.

Authors:  N R Polato; M M Gray; B A Gill; C G Becker; K L Casner; A S Flecker; B C Kondratieff; A C Encalada; N L Poff; W C Funk; K R Zamudio
Journal:  Heredity (Edinb)       Date:  2017-05-10       Impact factor: 3.821

8.  Life-history characteristics influence physiological strategies to cope with hypoxia in Himalayan birds.

Authors:  S Barve; A A Dhondt; V B Mathur; Z A Cheviron
Journal:  Proc Biol Sci       Date:  2016-11-30       Impact factor: 5.349

9.  Porcine colonization of the Americas: a 60k SNP story.

Authors:  W Burgos-Paz; C A Souza; H J Megens; Y Ramayo-Caldas; M Melo; C Lemús-Flores; E Caal; H W Soto; R Martínez; L A Alvarez; L Aguirre; V Iñiguez; M A Revidatti; O R Martínez-López; S Llambi; A Esteve-Codina; M C Rodríguez; R P M A Crooijmans; S R Paiva; L B Schook; M A M Groenen; M Pérez-Enciso
Journal:  Heredity (Edinb)       Date:  2012-12-19       Impact factor: 3.821

10.  Genome sequence of ground tit Pseudopodoces humilis and its adaptation to high altitude.

Authors:  Qingle Cai; Xiaoju Qian; Yongshan Lang; Yadan Luo; Jiaohui Xu; Shengkai Pan; Yuanyuan Hui; Caiyun Gou; Yue Cai; Meirong Hao; Jinyang Zhao; Songbo Wang; Zhaobao Wang; Xinming Zhang; Rongjun He; Jinchao Liu; Longhai Luo; Yingrui Li; Jun Wang
Journal:  Genome Biol       Date:  2013-03-28       Impact factor: 13.583

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