Literature DB >> 21929208

Direct determination of the base-pair force constant of DNA from the acoustic phonon dispersion of the double helix.

L van Eijck1, F Merzel, S Rols, J Ollivier, V T Forsyth, M R Johnson.   

Abstract

Quantifying the molecular elasticity of DNA is fundamental to our understanding of its biological functions. Recently different groups, through experiments on tailored DNA samples and numerical models, have reported a range of stretching force constants (0.3 to 3 N/m). However, the most direct, microscopic measurement of DNA stiffness is obtained from the dispersion of its vibrations. A new neutron scattering spectrometer and aligned, wet spun samples have enabled such measurements, which provide the first data of collective excitations of DNA and yield a force constant of 83 N/m. Structural and dynamic order persists unchanged to within 15 K of the melting point of the sample, precluding the formation of bubbles. These findings are supported by large scale phonon and molecular dynamics calculations, which reconcile hard and soft force constants.
© 2011 American Physical Society

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Year:  2011        PMID: 21929208     DOI: 10.1103/PhysRevLett.107.088102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  4 in total

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3.  A Programmable DNA-Silicification-Based Nanocavity for Single-Molecule Plasmonic Sensing.

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4.  Mesoscopic model parametrization of hydrogen bonds and stacking interactions of RNA from melting temperatures.

Authors:  Gerald Weber
Journal:  Nucleic Acids Res       Date:  2012-10-18       Impact factor: 16.971

  4 in total

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