Literature DB >> 21926022

This is SPIRAL-TAP: Sparse Poisson Intensity Reconstruction ALgorithms--theory and practice.

Zachary T Harmany1, Roummel F Marcia, Rebecca M Willett.   

Abstract

Observations in many applications consist of counts of discrete events, such as photons hitting a detector, which cannot be effectively modeled using an additive bounded or Gaussian noise model, and instead require a Poisson noise model. As a result, accurate reconstruction of a spatially or temporally distributed phenomenon (f*) from Poisson data (y) cannot be effectively accomplished by minimizing a conventional penalized least-squares objective function. The problem addressed in this paper is the estimation of f* from y in an inverse problem setting, where the number of unknowns may potentially be larger than the number of observations and f* admits sparse approximation. The optimization formulation considered in this paper uses a penalized negative Poisson log-likelihood objective function with nonnegativity constraints (since Poisson intensities are naturally nonnegative). In particular, the proposed approach incorporates key ideas of using separable quadratic approximations to the objective function at each iteration and penalization terms related to l1 norms of coefficient vectors, total variation seminorms, and partition-based multiscale estimation methods.

Year:  2011        PMID: 21926022     DOI: 10.1109/TIP.2011.2168410

Source DB:  PubMed          Journal:  IEEE Trans Image Process        ISSN: 1057-7149            Impact factor:   10.856


  11 in total

1.  Faster and less phototoxic 3D fluorescence microscopy using a versatile compressed sensing scheme.

Authors:  Maxime Woringer; Xavier Darzacq; Christophe Zimmer; Mustafa Mir
Journal:  Opt Express       Date:  2017-06-12       Impact factor: 3.894

2.  Computational segmentation of collagen fibers from second-harmonic generation images of breast cancer.

Authors:  Jeremy S Bredfeldt; Yuming Liu; Carolyn A Pehlke; Matthew W Conklin; Joseph M Szulczewski; David R Inman; Patricia J Keely; Robert D Nowak; Thomas R Mackie; Kevin W Eliceiri
Journal:  J Biomed Opt       Date:  2014-01       Impact factor: 3.170

3.  Edge-preserving PET image reconstruction using trust optimization transfer.

Authors:  Guobao Wang; Jinyi Qi
Journal:  IEEE Trans Med Imaging       Date:  2014-11-25       Impact factor: 10.048

4.  Fiber finding algorithm using stepwise tracing to identify biopolymer fibers in noisy 3D images.

Authors:  Ninna Struck Rossen; Anders Kyrsting; Amato J Giaccia; Janine Terra Erler; Lene Broeng Oddershede
Journal:  Biophys J       Date:  2021-08-17       Impact factor: 3.699

5.  Extreme Compressed Sensing of Poisson Rates from Multiple Measurements.

Authors:  Pavan K Kota; Daniel LeJeune; Rebekah A Drezek; Richard G Baraniuk
Journal:  IEEE Trans Signal Process       Date:  2022-05-03       Impact factor: 4.875

6.  Quantitative Segmentation of Fluorescence Microscopy Images of Heterogeneous Tissue: Application to the Detection of Residual Disease in Tumor Margins.

Authors:  Jenna L Mueller; Zachary T Harmany; Jeffrey K Mito; Stephanie A Kennedy; Yongbaek Kim; Leslie Dodd; Joseph Geradts; David G Kirsch; Rebecca M Willett; J Quincy Brown; Nimmi Ramanujam
Journal:  PLoS One       Date:  2013-06-18       Impact factor: 3.240

7.  Poisson-Gaussian Noise Reduction Using the Hidden Markov Model in Contourlet Domain for Fluorescence Microscopy Images.

Authors:  Sejung Yang; Byung-Uk Lee
Journal:  PLoS One       Date:  2015-09-09       Impact factor: 3.240

8.  Images from Bits: Non-Iterative Image Reconstruction for Quanta Image Sensors.

Authors:  Stanley H Chan; Omar A Elgendy; Xiran Wang
Journal:  Sensors (Basel)       Date:  2016-11-22       Impact factor: 3.576

9.  Fast first-photon ghost imaging.

Authors:  Xialin Liu; Jianhong Shi; Xiaoyan Wu; Guihua Zeng
Journal:  Sci Rep       Date:  2018-03-22       Impact factor: 4.379

10.  Photon-efficient imaging with a single-photon camera.

Authors:  Dongeek Shin; Feihu Xu; Dheera Venkatraman; Rudi Lussana; Federica Villa; Franco Zappa; Vivek K Goyal; Franco N C Wong; Jeffrey H Shapiro
Journal:  Nat Commun       Date:  2016-06-24       Impact factor: 14.919

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