Literature DB >> 21924763

An alternative splicing switch regulates embryonic stem cell pluripotency and reprogramming.

Mathieu Gabut1, Payman Samavarchi-Tehrani, Xinchen Wang, Valentina Slobodeniuc, Dave O'Hanlon, Hoon-Ki Sung, Manuel Alvarez, Shaheynoor Talukder, Qun Pan, Esteban O Mazzoni, Stephane Nedelec, Hynek Wichterle, Knut Woltjen, Timothy R Hughes, Peter W Zandstra, Andras Nagy, Jeffrey L Wrana, Benjamin J Blencowe.   

Abstract

Alternative splicing (AS) is a key process underlying the expansion of proteomic diversity and the regulation of gene expression. Here, we identify an evolutionarily conserved embryonic stem cell (ESC)-specific AS event that changes the DNA-binding preference of the forkhead family transcription factor FOXP1. We show that the ESC-specific isoform of FOXP1 stimulates the expression of transcription factor genes required for pluripotency, including OCT4, NANOG, NR5A2, and GDF3, while concomitantly repressing genes required for ESC differentiation. This isoform also promotes the maintenance of ESC pluripotency and contributes to efficient reprogramming of somatic cells into induced pluripotent stem cells. These results reveal a pivotal role for an AS event in the regulation of pluripotency through the control of critical ESC-specific transcriptional programs.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21924763     DOI: 10.1016/j.cell.2011.08.023

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  167 in total

1.  Downregulation of splicing factor SRSF3 induces p53β, an alternatively spliced isoform of p53 that promotes cellular senescence.

Authors:  Y Tang; I Horikawa; M Ajiro; A I Robles; K Fujita; A M Mondal; J K Stauffer; Z-M Zheng; C C Harris
Journal:  Oncogene       Date:  2012-07-09       Impact factor: 9.867

2.  Opposing roles of miR-294 and MBNL1/2 in shaping the gene regulatory network of embryonic stem cells.

Authors:  Da-Ren Wu; Kai-Li Gu; Jian-Cheng Yu; Xing Fu; Xi-Wen Wang; Wen-Ting Guo; Le-Qi Liao; Hong Zhu; Xiao-Shan Zhang; Jingyi Hui; Yangming Wang
Journal:  EMBO Rep       Date:  2018-05-07       Impact factor: 8.807

3.  Tissue-specific splicing of a ubiquitously expressed transcription factor is essential for muscle differentiation.

Authors:  Soji Sebastian; Hervé Faralli; Zizhen Yao; Patricia Rakopoulos; Carmen Palii; Yi Cao; Kulwant Singh; Qi-Cai Liu; Alphonse Chu; Arif Aziz; Marjorie Brand; Stephen J Tapscott; F Jeffrey Dilworth
Journal:  Genes Dev       Date:  2013-05-30       Impact factor: 11.361

4.  Stem cells: Regulation by alternative splicing.

Authors:  Yair Aaronson; Eran Meshorer
Journal:  Nature       Date:  2013-06-05       Impact factor: 49.962

5.  Drift and conservation of differential exon usage across tissues in primate species.

Authors:  Alejandro Reyes; Simon Anders; Robert J Weatheritt; Toby J Gibson; Lars M Steinmetz; Wolfgang Huber
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-03       Impact factor: 11.205

6.  SON sheds light on RNA splicing and pluripotency.

Authors:  Ilana Livyatan; Eran Meshorer
Journal:  Nat Cell Biol       Date:  2013-10       Impact factor: 28.824

7.  ACBD2/ECI2-Mediated Peroxisome-Mitochondria Interactions in Leydig Cell Steroid Biosynthesis.

Authors:  Jinjiang Fan; Xinlu Li; Leeyah Issop; Martine Culty; Vassilios Papadopoulos
Journal:  Mol Endocrinol       Date:  2016-05-11

8.  Alternative splicing of MBD2 supports self-renewal in human pluripotent stem cells.

Authors:  Yu Lu; Yuin-Han Loh; Hu Li; Marcella Cesana; Scott B Ficarro; Jignesh R Parikh; Nathan Salomonis; Cheng-Xu Delon Toh; Stelios T Andreadis; C John Luckey; James J Collins; George Q Daley; Jarrod A Marto
Journal:  Cell Stem Cell       Date:  2014-05-08       Impact factor: 24.633

9.  Downregulation of FOXP1 is required during germinal center B-cell function.

Authors:  Ainara Sagardoy; Jose I Martinez-Ferrandis; Sergio Roa; Karen L Bunting; María Angela Aznar; Olivier Elemento; Rita Shaknovich; Lorena Fontán; Vicente Fresquet; Ignacio Perez-Roger; Eloy F Robles; Linde De Smedt; Xavier Sagaert; Ari Melnick; Jose A Martinez-Climent
Journal:  Blood       Date:  2013-04-11       Impact factor: 22.113

Review 10.  Regulation of splicing by SR proteins and SR protein-specific kinases.

Authors:  Zhihong Zhou; Xiang-Dong Fu
Journal:  Chromosoma       Date:  2013-03-24       Impact factor: 4.316

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