Literature DB >> 21922424

Selection of optimal reference genes for expression analysis in the entomopathogenic fungus Beauveria bassiana during development, under changing nutrient conditions, and after exposure to abiotic stresses.

Yong-Hong Zhou1, Yong-Jun Zhang, Zhi-Bing Luo, Yan-Hua Fan, Gui-Rong Tang, Li-Ji Liu, Yan Pei.   

Abstract

The selection of suitable reference genes is crucial for accurate quantification of gene expression. To identify suitable reference genes in Beauveria bassiana, the expression of 14 candidates (18S, 28S, β-Tub, GAPD, γ-Act, TEF, HGPT, His3, His2A, TBP, CypA, CypB, PP1, and CrzA) was measured by quantitative polymerase chain reaction at different development stages and under various nutritional and stress conditions. Expression stability, as evaluated by the geNorm and NormFinder programs, revealed that His2A/γ-Act/CrzA was the most stably expressed set of genes throughout development, while 28S/PP1/CypA and His2A/γ-Act/CypA were the most stably expressed gene sets under a variety of nutritional and stress conditions, respectively. Overall, the most stably expressed genes under all conditions examined were PP1, γ-Act, and CypA.

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Year:  2011        PMID: 21922424     DOI: 10.1007/s00253-011-3561-3

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  13 in total

1.  Regulatory cascade and biological activity of Beauveria bassiana oosporein that limits bacterial growth after host death.

Authors:  Yanhua Fan; Xi Liu; Nemat O Keyhani; Guirong Tang; Yan Pei; Wenwen Zhang; Sheng Tong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

2.  Selection of suitable reference genes for quantitative real time PCR in different Tulasnella isolates and orchid-fungus symbiotic germination system.

Authors:  Tao Wang; Xiaolu Cao; Xiaojing Wang; Miao Chi; Lubin Li; Na Yao
Journal:  Mol Biol Rep       Date:  2021-01-03       Impact factor: 2.316

3.  Molecular insight into the endophytic growth of Beauveria bassiana within Phaseolus vulgaris in the presence or absence of Tetranychus urticae.

Authors:  Charbel Al Khoury
Journal:  Mol Biol Rep       Date:  2021-03-23       Impact factor: 2.316

4.  Tracking the best reference genes for RT-qPCR data normalization in filamentous fungi.

Authors:  Agustina Llanos; Jean Marie François; Jean-Luc Parrou
Journal:  BMC Genomics       Date:  2015-02-14       Impact factor: 3.969

5.  Validation of reference genes for normalization of gene expression by qRT-PCR in a resveratrol-producing entophytic fungus (Alternaria sp. MG1).

Authors:  Jin-Xin Che; Jun-Ling Shi; Yao Lu; Yan-Lin Liu
Journal:  AMB Express       Date:  2016-11-08       Impact factor: 3.298

6.  Selection of reference genes from Shiraia bambusicola for RT-qPCR analysis under different culturing conditions.

Authors:  Chen Zhang; Tong Li; Cheng-Lin Hou; Xiao-Ye Shen
Journal:  AMB Express       Date:  2017-01-03       Impact factor: 3.298

7.  Validation of reference genes in Solenopsis invicta in different developmental stages, castes and tissues.

Authors:  Daifeng Cheng; Zhiling Zhang; Xiaofang He; Guangwen Liang
Journal:  PLoS One       Date:  2013-02-28       Impact factor: 3.240

8.  Comparative Validation of Conventional and RNA-Seq Data-Derived Reference Genes for qPCR Expression Studies of Colletotrichum kahawae.

Authors:  Ana Vieira; Ana Cabral; Joana Fino; Helena G Azinheira; Andreia Loureiro; Pedro Talhinhas; Ana Sofia Pires; Vitor Varzea; Pilar Moncada; Helena Oliveira; Maria do Céu Silva; Octávio S Paulo; Dora Batista
Journal:  PLoS One       Date:  2016-03-07       Impact factor: 3.240

9.  Identification of suitable reference genes during the formation of chlamydospores in Clonostachys rosea 67-1.

Authors:  Jun Zhang; Zhanbin Sun; Shidong Li; Manhong Sun
Journal:  Microbiologyopen       Date:  2017-07-05       Impact factor: 3.139

10.  Reference Gene Selection for Quantitative Real-Time PCR of Mycelia from Lentinula edodes under High-Temperature Stress.

Authors:  Xu Zhao; Huanling Yang; Mingjie Chen; Xiaoxia Song; Changxia Yu; Yan Zhao; Yuejin Wu
Journal:  Biomed Res Int       Date:  2018-06-11       Impact factor: 3.411

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