Literature DB >> 21922077

ONLINE THREE-DIMENSIONAL DENDRITIC SPINES MOPHOLOGICAL CLASSIFICATION BASED ON SEMI-SUPERVISED LEARNING.

Peng Shi1, Xiaobo Zhou, Qing Li, Matthew Baron, Merilee A Teylan, Yong Kim, Stephen T C Wong.   

Abstract

Recent studies on neuron imaging show that there is a strong relationship between the functional properties of a neuron and its morphology, especially its dendritic spine structures. However, most of the current methods for morphological spine classification only concern features in two-dimensional (2D) space, which consequently decreases the accuracy of dendritic spine analysis. In this paper, we propose a semi-supervised learning (SSL) framework, in which spine phenotypes in three-dimensional (3D) space are considered. With training only on a few pre-classified inputs, the rest of the spines can be identified effectively. We also derived a new scheme using an affinity matrix between features to further improve the accuracy. Our experimental results indicate that a small training dataset is sufficient to classify detected dendritic spines.

Entities:  

Year:  2009        PMID: 21922077      PMCID: PMC3171508          DOI: 10.1109/ISBI.2009.5193228

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  3 in total

1.  A novel computational approach for automatic dendrite spines detection in two-photon laser scan microscopy.

Authors:  Jie Cheng; Xiaobo Zhou; Eric Miller; Rochelle M Witt; Jinmin Zhu; Bernardo L Sabatini; Steven T C Wong
Journal:  J Neurosci Methods       Date:  2007-05-24       Impact factor: 2.390

2.  Automatic dendritic spine analysis in two-photon laser scanning microscopy images.

Authors:  Wenjia Bai; Xiaobo Zhou; Liang Ji; Jie Cheng; Stephen T C Wong
Journal:  Cytometry A       Date:  2007-10       Impact factor: 4.355

3.  Automated three-dimensional detection and shape classification of dendritic spines from fluorescence microscopy images.

Authors:  Alfredo Rodriguez; Douglas B Ehlenberger; Dara L Dickstein; Patrick R Hof; Susan L Wearne
Journal:  PLoS One       Date:  2008-04-23       Impact factor: 3.240

  3 in total

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