Literature DB >> 21921198

Yeast Rrn7 and human TAF1B are TFIIB-related RNA polymerase I general transcription factors.

Bruce A Knutson1, Steven Hahn.   

Abstract

Eukaryotic and archaeal multisubunit RNA polymerases (Pols) are structurally related and require several similar components for transcription initiation. However, none of the Pol I factors were known to share homology with transcription factor IIB (TFIIB) or TFIIB-related proteins, key factors in the initiation mechanisms of the other Pols. Here we show that Rrn7, a subunit of the yeast Pol I core factor, and its human ortholog TAF1B are TFIIB-like factors. Although distantly related, Rrn7 shares many activities associated with TFIIB-like factors. Domain swaps between TFIIB-related factors show that Rrn7 is most closely related to the Pol III general factor Brf1. Our results point to the conservation of initiation mechanisms among multisubunit Pols and reveal a key function of yeast core factor/human SL1 in Pol I transcription.

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Year:  2011        PMID: 21921198      PMCID: PMC3319074          DOI: 10.1126/science.1207699

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  23 in total

1.  New model for the yeast RNA polymerase I transcription cycle.

Authors:  P Aprikian; B Moorefield; R H Reeder
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

Review 2.  Recruitment of RNA polymerase III to its target promoters.

Authors:  Laura Schramm; Nouria Hernandez
Journal:  Genes Dev       Date:  2002-10-15       Impact factor: 11.361

3.  Binding of TFIIB to RNA polymerase II: Mapping the binding site for the TFIIB zinc ribbon domain within the preinitiation complex.

Authors:  Hung-Ta Chen; Steven Hahn
Journal:  Mol Cell       Date:  2003-08       Impact factor: 17.970

Review 4.  Structure and mechanism of the RNA polymerase II transcription machinery.

Authors:  Steven Hahn
Journal:  Nat Struct Mol Biol       Date:  2004-05       Impact factor: 15.369

5.  Synthesis of large rRNAs by RNA polymerase II in mutants of Saccharomyces cerevisiae defective in RNA polymerase I.

Authors:  Y Nogi; R Yano; M Nomura
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

6.  Assembly of transcriptionally active RNA polymerase I initiation factor SL1 from recombinant subunits.

Authors:  J C Zomerdijk; H Beckmann; L Comai; R Tjian
Journal:  Science       Date:  1994-12-23       Impact factor: 47.728

7.  Conserved functional domains of the RNA polymerase III general transcription factor BRF.

Authors:  B Khoo; B Brophy; S P Jackson
Journal:  Genes Dev       Date:  1994-12-01       Impact factor: 11.361

8.  The Brf1 and Bdp1 subunits of transcription factor TFIIIB bind to overlapping sites in the tetratricopeptide repeats of Tfc4.

Authors:  Yanling Liao; Ian M Willis; Robyn D Moir
Journal:  J Biol Chem       Date:  2003-08-20       Impact factor: 5.157

9.  Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms.

Authors:  David A Bushnell; Kenneth D Westover; Ralph E Davis; Roger D Kornberg
Journal:  Science       Date:  2004-02-13       Impact factor: 47.728

10.  A plant-specific transcription factor IIB-related protein, pBRP2, is involved in endosperm growth control.

Authors:  Emilie Cavel; Marion Pillot; Dominique Pontier; Sylvie Lahmy; Natacha Bies-Etheve; Danielle Vega; Daniel Grimanelli; Thierry Lagrange
Journal:  PLoS One       Date:  2011-02-24       Impact factor: 3.240

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  33 in total

1.  Mapping the protein interaction network for TFIIB-related factor Brf1 in the RNA polymerase III preinitiation complex.

Authors:  Seok-Kooi Khoo; Chih-Chien Wu; Yu-Chun Lin; Jin-Cheng Lee; Hung-Ta Chen
Journal:  Mol Cell Biol       Date:  2013-11-25       Impact factor: 4.272

Review 2.  Structural insights into transcription initiation by RNA polymerase II.

Authors:  Sebastian Grünberg; Steven Hahn
Journal:  Trends Biochem Sci       Date:  2013-10-11       Impact factor: 13.807

3.  RNA polymerase III subunit architecture and implications for open promoter complex formation.

Authors:  Chih-Chien Wu; Franz Herzog; Stefan Jennebach; Yu-Chun Lin; Chih-Yu Pai; Ruedi Aebersold; Patrick Cramer; Hung-Ta Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-06       Impact factor: 11.205

4.  Molecular basis of Rrn3-regulated RNA polymerase I initiation and cell growth.

Authors:  Claudia Blattner; Stefan Jennebach; Franz Herzog; Andreas Mayer; Alan C M Cheung; Gregor Witte; Kristina Lorenzen; Karl-Peter Hopfner; Albert J R Heck; Ruedi Aebersold; Patrick Cramer
Journal:  Genes Dev       Date:  2011-09-22       Impact factor: 11.361

Review 5.  Transcription Regulation in Archaea.

Authors:  Alexandra M Gehring; Julie E Walker; Thomas J Santangelo
Journal:  J Bacteriol       Date:  2016-06-27       Impact factor: 3.490

Review 6.  Eukaryotic transcription initiation machinery visualized at molecular level.

Authors:  Yan Han; Yuan He
Journal:  Transcription       Date:  2016-10-19

7.  A Region of Bdp1 Necessary for Transcription Initiation That Is Located within the RNA Polymerase III Active Site Cleft.

Authors:  Hui-Lan Hu; Chih-Chien Wu; Jin-Cheng Lee; Hung-Ta Chen
Journal:  Mol Cell Biol       Date:  2015-06-08       Impact factor: 4.272

8.  Changes in rRNA transcription influence proliferation and cell fate within a stem cell lineage.

Authors:  Qiao Zhang; Nevine A Shalaby; Michael Buszczak
Journal:  Science       Date:  2014-01-17       Impact factor: 47.728

Review 9.  Basic mechanisms in RNA polymerase I transcription of the ribosomal RNA genes.

Authors:  Sarah J Goodfellow; Joost C B M Zomerdijk
Journal:  Subcell Biochem       Date:  2013

Review 10.  TFIIB-related factors in RNA polymerase I transcription.

Authors:  Bruce A Knutson; Steven Hahn
Journal:  Biochim Biophys Acta       Date:  2012-08-30
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