Literature DB >> 21918028

Adjusted Wallace coefficient as a measure of congruence between typing methods.

Ana Severiano1, Francisco R Pinto, Mário Ramirez, João A Carriço.   

Abstract

We propose a new coefficient, the adjusted Wallace coefficient (AW), and corresponding confidence intervals (CI) as quantitative measures of congruence between typing methods. The performance of the derived CI was evaluated using simulated data. Published microbial typing data were used to demonstrate the advantages of AW over the Wallace coefficient.

Mesh:

Year:  2011        PMID: 21918028      PMCID: PMC3209087          DOI: 10.1128/JCM.00624-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  15 in total

Review 1.  Role of genomic typing in taxonomy, evolutionary genetics, and microbial epidemiology.

Authors:  A van Belkum; M Struelens; A de Visser; H Verbrugh; M Tibayrenc
Journal:  Clin Microbiol Rev       Date:  2001-07       Impact factor: 26.132

2.  Evaluation of multiple-locus variable-number tandem-repeat analysis for typing a polyclonal hospital-acquired methicillin-resistant Staphylococcus aureus population in an area where such infections are endemic.

Authors:  Belinda Rivero-Pérez; Eduardo Pérez-Roth; Sebastián Méndez-Alvarez
Journal:  J Clin Microbiol       Date:  2010-06-02       Impact factor: 5.948

3.  Nonoutbreak surveillance of group A streptococci causing invasive disease in Portugal identified internationally disseminated clones among members of a genetically heterogeneous population.

Authors:  A Friães; M Ramirez; J Melo-Cristino
Journal:  J Clin Microbiol       Date:  2007-04-25       Impact factor: 5.948

4.  Illustration of a common framework for relating multiple typing methods by application to macrolide-resistant Streptococcus pyogenes.

Authors:  J A Carriço; C Silva-Costa; J Melo-Cristino; F R Pinto; H de Lencastre; J S Almeida; M Ramirez
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

5.  Cross-species spread of SCCmec IV subtypes in staphylococci.

Authors:  Davida S Smyth; Agnes Wong; D Ashley Robinson
Journal:  Infect Genet Evol       Date:  2010-12-21       Impact factor: 3.342

6.  Evaluation of mycobacterial interspersed repetitive-unit-variable-number tandem-repeat analysis and spoligotyping for genotyping of Mycobacterium bovis isolates and a comparison with restriction fragment length polymorphism typing.

Authors:  Joanne McLernon; Eamon Costello; Orla Flynn; Gillian Madigan; Fergus Ryan
Journal:  J Clin Microbiol       Date:  2010-09-29       Impact factor: 5.948

7.  The DiversiLab system versus pulsed-field gel electrophoresis: characterisation of extended spectrum β-lactamase producing Escherichia coli and Klebsiella pneumoniae.

Authors:  Alma Brolund; Sara Hæggman; Petra J Edquist; Lena Gezelius; Barbro Olsson-Liljequist; Karin Tegmark Wisell; Christian G Giske
Journal:  J Microbiol Methods       Date:  2010-09-16       Impact factor: 2.363

8.  Evaluation of jackknife and bootstrap for defining confidence intervals for pairwise agreement measures.

Authors:  Ana Severiano; João A Carriço; D Ashley Robinson; Mário Ramirez; Francisco R Pinto
Journal:  PLoS One       Date:  2011-05-18       Impact factor: 3.240

9.  eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data.

Authors:  Edward J Feil; Bao C Li; David M Aanensen; William P Hanage; Brian G Spratt
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

10.  Penicillin-resistant Streptococcus pneumoniae strains recovered in Houston: identification and molecular characterization of multiple clones.

Authors:  J Versalovic; V Kapur; E O Mason; U Shah; T Koeuth; J R Lupski; J M Musser
Journal:  J Infect Dis       Date:  1993-04       Impact factor: 5.226

View more
  66 in total

1.  Prospective genotyping of hospital-acquired methicillin-resistant Staphylococcus aureus isolates by use of a novel, highly discriminatory binary typing system.

Authors:  Matthew V N O'Sullivan; Fei Zhou; Vitali Sintchenko; Gwendolyn L Gilbert
Journal:  J Clin Microbiol       Date:  2012-08-15       Impact factor: 5.948

2.  Phenotypic and genotypic characterization of Canadian clinical isolates of Vibrio parahaemolyticus collected from 2000 to 2009.

Authors:  Swapan K Banerjee; Ashley K Kearney; Celine A Nadon; Christy-Lynn Peterson; Kevin Tyler; Laurene Bakouche; Clifford G Clark; Linda Hoang; Matthew W Gilmour; Jeffrey M Farber
Journal:  J Clin Microbiol       Date:  2014-01-22       Impact factor: 5.948

3.  Rapid and easy identification of capsular serotypes of Streptococcus pneumoniae by use of fragment analysis by automated fluorescence-based capillary electrophoresis.

Authors:  Laura Selva; Eva del Amo; Pedro Brotons; Carmen Muñoz-Almagro
Journal:  J Clin Microbiol       Date:  2012-08-08       Impact factor: 5.948

4.  Comparison between Salmonella enterica Serotype Enteritidis Genotyping Methods and Phage Type.

Authors:  Alessandra De Cesare; Keshav Krishnamani; Antonio Parisi; Antonia Ricci; Ida Luzzi; Lisa Barco; Alex Lucchi; Angela Miccolupo; Gerardo Manfreda
Journal:  J Clin Microbiol       Date:  2015-07-01       Impact factor: 5.948

5.  Molecular Epidemiology of a Vancomycin-Intermediate Heteroresistant Staphylococcus epidermidis Outbreak in a Neonatal Intensive Care Unit.

Authors:  Jasmine Chong; Caroline Quach; Ana C Blanchard; Philippe Guillaume Poliquin; George R Golding; Céline Laferrière; Simon Lévesque
Journal:  Antimicrob Agents Chemother       Date:  2016-09-23       Impact factor: 5.191

6.  Comparison of pulsed-gel electrophoresis and a commercial repetitive-element PCR method for assessment of methicillin-resistant Staphylococcus aureus clustering in different health care facilities.

Authors:  Christopher J Crnich; Megan Duster; Simone Warrack; Dennis Maki; Nasia Safdar
Journal:  J Clin Microbiol       Date:  2014-03-26       Impact factor: 5.948

7.  Development of a new molecular subtyping tool for Salmonella enterica serovar Enteritidis based on single nucleotide polymorphism genotyping using PCR.

Authors:  Dele Ogunremi; Hilary Kelly; Andrée Ann Dupras; Sebastien Belanger; John Devenish
Journal:  J Clin Microbiol       Date:  2014-10-08       Impact factor: 5.948

8.  Comparison of three typing methods for Pseudomonas aeruginosa isolates from patients with cystic fibrosis.

Authors:  V Waters; J E A Zlosnik; Y C W Yau; D P Speert; S D Aaron; D S Guttman
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2012-07-29       Impact factor: 3.267

9.  Molecular epidemiology of group B streptococci in Ireland reveals a diverse population with evidence of capsular switching.

Authors:  Mary Meehan; Robert Cunney; Mary Cafferkey
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2014-01-28       Impact factor: 3.267

10.  Differences between macrolide-resistant and -susceptible Streptococcus pyogenes: importance of clonal properties in addition to antibiotic consumption.

Authors:  C Silva-Costa; A Friães; M Ramirez; J Melo-Cristino
Journal:  Antimicrob Agents Chemother       Date:  2012-08-20       Impact factor: 5.191

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.