Literature DB >> 21915242

Label-free microfluidic characterization of temperature-dependent biomolecular interactions.

Thaihuu Nguyen, Renjun Pei, Donald W Landry, Milan N Stojanovic, Qiao Lin.   

Abstract

We present a microfluidic approach to characterizing temperature-dependent biomolecular interactions. Solvated L-arginine vasopressin (AVP) and its immobilized RNA aptamer (spiegelmer) were allowed to achieve equilibrium binding in a microchip at a series of selected temperatures. Unbound AVP were collected and analyzed with matrix-assisted laser desorption∕ionization mass spectrometry (MALDI-MS), yielding melting curves that reveal highly temperature-dependent zones in which affinity binding (36-45 °C) or dissociation (25-33 °C and 50-65 °C) occurs. Additionally, temperature-dependent binding isotherms were constructed; from these, thermodynamic quantities involved in binding were extracted. The results illustrated a strong change in heat capacity of interaction for this system, suggesting a considerable thermodynamic influence controlling vasopressin-spiegelmer interaction.

Entities:  

Year:  2011        PMID: 21915242      PMCID: PMC3170392          DOI: 10.1063/1.3620417

Source DB:  PubMed          Journal:  Biomicrofluidics        ISSN: 1932-1058            Impact factor:   2.800


  11 in total

Review 1.  From DNA biosensors to gene chips.

Authors:  J Wang
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

Review 2.  Label-free screening of bio-molecular interactions.

Authors:  Matthew A Cooper
Journal:  Anal Bioanal Chem       Date:  2003-08-07       Impact factor: 4.142

Review 3.  Aptamers: molecular tools for analytical applications.

Authors:  Teresa Mairal; Veli Cengiz Ozalp; Pablo Lozano Sánchez; Mònica Mir; Ioanis Katakis; Ciara K O'Sullivan
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4.  The signal-to-noise ratio as the measure for the quantification of lysophospholipids by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry.

Authors:  M Petković; J Schiller; J Müller; M Müller; K Arnold; J Arnhold
Journal:  Analyst       Date:  2001-07       Impact factor: 4.616

5.  Kinetics of antibody binding to solid-phase-immobilised antigen. Effect of diffusion rate limitation and steric interaction.

Authors:  H Nygren; M Werthen; M Stenberg
Journal:  J Immunol Methods       Date:  1987-07-16       Impact factor: 2.303

6.  Antigen-antibody binding and mass transport by convection and diffusion to a surface: a two-dimensional computer model of binding and dissociation kinetics.

Authors:  R W Glaser
Journal:  Anal Biochem       Date:  1993-08-15       Impact factor: 3.365

7.  Microcalorimetrics studies of the thermodynamics and binding mechanism between L-tyrosinamide and aptamer.

Authors:  Po-Hsun Lin; Shih-Lun Yen; Ming-Shen Lin; Yung Chang; Selva Roselin Louis; Akon Higuchi; Wen-Yih Chen
Journal:  J Phys Chem B       Date:  2008-05-06       Impact factor: 2.991

8.  Temperature-dependent simultaneous ligand binding in human serum albumin.

Authors:  Sudarson Sekhar Sinha; Rajib Kumar Mitra; Samir Kumar Pal
Journal:  J Phys Chem B       Date:  2008-04-03       Impact factor: 2.991

9.  An L-RNA-based aquaretic agent that inhibits vasopressin in vivo.

Authors:  Werner G Purschke; Dirk Eulberg; Klaus Buchner; Stefan Vonhoff; Sven Klussmann
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-17       Impact factor: 11.205

Review 10.  Structural studies of the purine and SAM binding riboswitches.

Authors:  S D Gilbert; R K Montange; C D Stoddard; R T Batey
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2006
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  2 in total

1.  Electrical Stimulus Controlled Binding/Unbinding of Human Thrombin-Aptamer Complex.

Authors:  Agnivo Gosai; Xiao Ma; Ganesh Balasubramanian; Pranav Shrotriya
Journal:  Sci Rep       Date:  2016-11-22       Impact factor: 4.379

2.  Integrated Microfluidic Isolation of Aptamers Using Electrophoretic Oligonucleotide Manipulation.

Authors:  Jinho Kim; Timothy R Olsen; Jing Zhu; John P Hilton; Kyung-Ae Yang; Renjun Pei; Milan N Stojanovic; Qiao Lin
Journal:  Sci Rep       Date:  2016-05-24       Impact factor: 4.379

  2 in total

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