Literature DB >> 21914887

Genome sequence of the ruminal bacterium Megasphaera elsdenii.

Hans Marx1, Alexandra Bettina Graf, Nadine Elpida Tatto, Gerhard Günther Thallinger, Diethard Mattanovich, Michael Sauer.   

Abstract

Megasphaera elsdenii is a Gram-negative ruminal bacterium. It is being investigated as a probiotic supplement for ruminants as it may provide benefits for energy balance and animal productivity. Furthermore, it is of biotechnological interest due to its capability of producing various volatile fatty acids. Here we report the complete genome sequence of M. elsdenii DSM 20460, the type strain for the species.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21914887      PMCID: PMC3187434          DOI: 10.1128/JB.05861-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  11 in total

1.  Properties of a fatty acid forming organism isolated from the rumen of sheep.

Authors:  S R ELSDEN; F M GILCHRIST; D LEWIS; B E VOLCANI
Journal:  J Bacteriol       Date:  1956-11       Impact factor: 3.490

2.  Origin of replication in circular prokaryotic chromosomes.

Authors:  Peder Worning; Lars J Jensen; Peter F Hallin; Hans-Henrik Staerfeldt; David W Ussery
Journal:  Environ Microbiol       Date:  2006-02       Impact factor: 5.491

3.  Choosing BLAST options for better detection of orthologs as reciprocal best hits.

Authors:  Gabriel Moreno-Hagelsieb; Kristen Latimer
Journal:  Bioinformatics       Date:  2007-11-26       Impact factor: 6.937

4.  The formation of fatty acids by a Gram-negative coccus.

Authors:  S R ELSDEN; F M C GILCHRIST; D LEWIS; B E VOLCANI
Journal:  Biochem J       Date:  1951-10       Impact factor: 3.857

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Rumen pH and fermentation characteristics in dairy cows supplemented with Megasphaera elsdenii NCIMB 41125 in early lactation.

Authors:  P C Aikman; P H Henning; D J Humphries; C H Horn
Journal:  J Dairy Sci       Date:  2011-06       Impact factor: 4.034

7.  The Pfam protein families database.

Authors:  Robert D Finn; Jaina Mistry; John Tate; Penny Coggill; Andreas Heger; Joanne E Pollington; O Luke Gavin; Prasad Gunasekaran; Goran Ceric; Kristoffer Forslund; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman
Journal:  Nucleic Acids Res       Date:  2009-11-17       Impact factor: 16.971

8.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

10.  The COG database: an updated version includes eukaryotes.

Authors:  Roman L Tatusov; Natalie D Fedorova; John D Jackson; Aviva R Jacobs; Boris Kiryutin; Eugene V Koonin; Dmitri M Krylov; Raja Mazumder; Sergei L Mekhedov; Anastasia N Nikolskaya; B Sridhar Rao; Sergei Smirnov; Alexander V Sverdlov; Sona Vasudevan; Yuri I Wolf; Jodie J Yin; Darren A Natale
Journal:  BMC Bioinformatics       Date:  2003-09-11       Impact factor: 3.169

View more
  16 in total

1.  A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia.

Authors:  Natalya Yutin; Michael Y Galperin
Journal:  Environ Microbiol       Date:  2013-07-09       Impact factor: 5.491

2.  Lactate and acrylate metabolism by Megasphaera elsdenii under batch and steady-state conditions.

Authors:  Rupal Prabhu; Elliot Altman; Mark A Eiteman
Journal:  Appl Environ Microbiol       Date:  2012-09-28       Impact factor: 4.792

3.  Acrylyl-coenzyme A reductase, an enzyme involved in the assimilation of 3-hydroxypropionate by Rhodobacter sphaeroides.

Authors:  Marie Asao; Birgit E Alber
Journal:  J Bacteriol       Date:  2013-08-16       Impact factor: 3.490

4.  Effects of spray-dried porcine plasma on fecal microbiota in nursery pigs.

Authors:  Huyen Tran; Christopher L Anderson; Justin W Bundy; Samodha C Fernando; Phillip S Miller; Thomas E Burkey
Journal:  J Anim Sci       Date:  2018-04-03       Impact factor: 3.159

5.  Identification and characterization of three novel lipases belonging to families II and V from Anaerovibrio lipolyticus 5ST.

Authors:  Florence Privé; Naheed N Kaderbhai; Susan Girdwood; Hilary J Worgan; Eric Pinloche; Nigel D Scollan; Sharon A Huws; C Jamie Newbold
Journal:  PLoS One       Date:  2013-08-12       Impact factor: 3.240

6.  Non-contiguous finished genome sequence and description of Megasphaera massiliensis sp. nov.

Authors:  Roshan Padmanabhan; Jean-Christophe Lagier; Nicole Prisca Makaya Dangui; Caroline Michelle; Carine Couderc; Didier Raoult; Pierre-Edouard Fournier
Journal:  Stand Genomic Sci       Date:  2013-08-07

7.  From rumen to industry.

Authors:  Michael Sauer; Hans Marx; Diethard Mattanovich
Journal:  Microb Cell Fact       Date:  2012-09-10       Impact factor: 5.328

8.  Comparative genome analysis of Megasphaera sp. reveals niche specialization and its potential role in the human gut.

Authors:  Sudarshan Anand Shetty; Nachiket Prakash Marathe; Vikram Lanjekar; Dilip Ranade; Yogesh S Shouche
Journal:  PLoS One       Date:  2013-11-18       Impact factor: 3.240

9.  A Longitudinal Study of the Feline Faecal Microbiome Identifies Changes into Early Adulthood Irrespective of Sexual Development.

Authors:  Oliver Deusch; Ciaran O'Flynn; Alison Colyer; Kelly S Swanson; David Allaway; Penelope Morris
Journal:  PLoS One       Date:  2015-12-14       Impact factor: 3.240

10.  Biochemical and genome sequence analyses of Megasphaera sp. strain DISK18 from dental plaque of a healthy individual reveals commensal lifestyle.

Authors:  Nayudu Nallabelli; Prashant P Patil; Vijay Kumar Pal; Namrata Singh; Ashish Jain; Prabhu B Patil; Vishakha Grover; Suresh Korpole
Journal:  Sci Rep       Date:  2016-09-21       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.