Literature DB >> 21914883

Complete genomic sequence of the equol-producing bacterium Eggerthella sp. strain YY7918, isolated from adult human intestine.

Shin-ichiro Yokoyama1, Kenshiro Oshima, Izumi Nomura, Masahira Hattori, Tohru Suzuki.   

Abstract

Eggerthella sp. strain YY7918 was isolated from the intestinal flora of a healthy human. It metabolizes daidzein (a soybean isoflavonoid) and produces S-equol, which has stronger estrogenic activities than daidzein. Here, we report the finished and annotated genomic sequence of this organism.

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Year:  2011        PMID： 21914883      PMCID： PMC3187411          DOI： 10.1128/JB.05626-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  Automated finishing with autofinish.

Authors:  D Gordon; C Desmarais; P Green
Journal:  Genome Res       Date:  2001-04       Impact factor: 9.043

2.  Cloning and expression of a novel NADP(H)-dependent daidzein reductase, an enzyme involved in the metabolism of daidzein, from equol-producing Lactococcus strain 20-92.

Authors:  Yoshikazu Shimada; Setsuko Yasuda; Masayuki Takahashi; Takashi Hayashi; Norihiro Miyazawa; Ikutaro Sato; Yasuhiro Abiru; Shigeto Uchiyama; Haretsugu Hishigaki
Journal:  Appl Environ Microbiol       Date:  2010-07-16       Impact factor: 4.792

3.  Isolation and characterization of a novel equol-producing bacterium from human feces.

Authors:  Shin-ichiro Yokoyama; Tohru Suzuki
Journal:  Biosci Biotechnol Biochem       Date:  2008-10-07       Impact factor: 2.043

4.  Arginine, a growth-limiting factor for Eubacterium lentum.

Authors:  J F Sperry; T D Wilkins
Journal:  J Bacteriol       Date:  1976-08       Impact factor: 3.490

5.  Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255).

Authors:  Elizabeth Saunders; Rüdiger Pukall; Birte Abt; Alla Lapidus; Tijana Glavina Del Rio; Alex Copeland; Hope Tice; Jan-Fang Cheng; Susan Lucas; Feng Chen; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Patrick Chain; Linda Meincke; David Sims; Thomas Brettin; John C Detter; Markus Göker; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Cliff Han
Journal:  Stand Genomic Sci       Date:  2009-09-28

6.  VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics.

Authors:  Jian Yang; Lihong Chen; Lilian Sun; Jun Yu; Qi Jin
Journal:  Nucleic Acids Res       Date:  2007-11-04       Impact factor: 16.971

7.  KAAS: an automatic genome annotation and pathway reconstruction server.

Authors:  Yuki Moriya; Masumi Itoh; Shujiro Okuda; Akiyasu C Yoshizawa; Minoru Kanehisa
Journal:  Nucleic Acids Res       Date:  2007-05-25       Impact factor: 16.971
  7 in total
  14 in total

1.  Complete genomic sequence of the O-desmethylangolensin-producing bacterium Clostridium rRNA cluster XIVa strain SY8519, isolated from adult human intestine.

Authors:  Shin-ichiro Yokoyama; Kenshiro Oshima; Izumi Nomura; Masahira Hattori; Tohru Suzuki
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

2.  Eggerthella lenta bacteremia complicated by spondylodiscitis, psoas abscess, and meningitis.

Authors:  B J Gardiner; T M Korman; R K Junckerstorff
Journal:  J Clin Microbiol       Date:  2014-01-15       Impact factor: 5.948

3.  The Chemistry of Gut Microbial Metabolism of Polyphenols.

Authors:  Jan F Stevens; Claudia S Maier
Journal:  Phytochem Rev       Date:  2016-03-11       Impact factor: 5.374

4.  Identification and expression of genes involved in the conversion of daidzein and genistein by the equol-forming bacterium Slackia isoflavoniconvertens.

Authors:  Christine Schröder; Anastasia Matthies; Wolfram Engst; Michael Blaut; Annett Braune
Journal:  Appl Environ Microbiol       Date:  2013-03-29       Impact factor: 4.792

5.  Clinical and microbiological characteristics of Eggerthella lenta bacteremia.

Authors:  B J Gardiner; A Y Tai; D Kotsanas; M J Francis; S A Roberts; S A Ballard; R K Junckerstorff; T M Korman
Journal:  J Clin Microbiol       Date:  2014-12-17       Impact factor: 5.948

6.  S-(-)equol producing status not associated with breast cancer risk among low isoflavone-consuming US postmenopausal women undergoing a physician-recommended breast biopsy.

Authors:  Mandeep K Virk-Baker; Stephen Barnes; Helen Krontiras; Tim R Nagy
Journal:  Nutr Res       Date:  2013-12-18       Impact factor: 3.315

7.  Complete Genome Sequence of the Equol-Producing Bacterium Adlercreutzia equolifaciens DSM 19450T.

Authors:  Hidehiro Toh; Kenshiro Oshima; Takehito Suzuki; Masahira Hattori; Hidetoshi Morita
Journal:  Genome Announc       Date:  2013-09-19

Review 8.  The role of colonic bacteria in the metabolism of the natural isoflavone daidzin to equol.

Authors:  Fatemeh Rafii
Journal:  Metabolites       Date:  2015-01-14

9.  Isolation and identification of new bacterial stains producing equol from Pueraria lobata extract fermentation.

Authors:  Jeong Eun Kwon; Jaewon Lim; Inhye Kim; Donghyuk Kim; Se Chan Kang
Journal:  PLoS One       Date:  2018-02-15       Impact factor: 3.240

10.  The production of S-equol from daidzein is associated with a cluster of three genes in Eggerthella sp. YY7918.

Authors:  Yuika Kawada; Shinichiro Yokoyama; Emiko Yanase; Toshio Niwa; Tohru Suzuki
Journal:  Biosci Microbiota Food Health       Date:  2016-03-31
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