Literature DB >> 21912866

Regional data refine local predictions: modeling the distribution of plant species abundance on a portion of the central plains.

Nicholas E Young1, Thomas J Stohlgren, Paul H Evangelista, Sunil Kumar, Jim Graham, Greg Newman.   

Abstract

Species distribution models are frequently used to predict species occurrences in novel conditions, yet few studies have examined the consequences of extrapolating locally collected data to regional landscapes. Similarly, the process of using regional data to inform local prediction for species distribution models has not been adequately evaluated. Using boosted regression trees, we examined errors associated with extrapolating models developed with locally collected abundance data to regional-scale spatial extents and associated with using regional data for predictions at a local extent for a native and non-native plant species across the northeastern central plains of Colorado. Our objectives were to compare model results and accuracy between those developed locally and extrapolated regionally, those developed regionally and extrapolated locally, and to evaluate extending species distribution modeling from predicting the probability of presence to predicting abundance. We developed models to predict the spatial distribution of plant species abundance using topographic, remotely sensed, land cover and soil taxonomic predictor variables. We compared model predicted mean and range abundance values to observed values between local and regional. We also evaluated model prediction performance based on Pearson's correlation coefficient. We show that: (1) extrapolating local models to regional extents may restrict predictions, (2) regional data can help refine and improve local predictions, and (3) boosted regression trees can be useful to model and predict plant species abundance. Regional sampling designed in concert with large sampling frameworks such as the National Ecological Observatory Network may improve our ability to monitor changes in local species abundance.

Mesh:

Substances:

Year:  2011        PMID: 21912866     DOI: 10.1007/s10661-011-2351-9

Source DB:  PubMed          Journal:  Environ Monit Assess        ISSN: 0167-6369            Impact factor:   2.513


  14 in total

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2.  Assessing vulnerability to invasion by nonnative plant species at multiple spatial scales.

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3.  POC plots: calibrating species distribution models with presence-only data.

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4.  The art and science of weed mapping.

Authors:  David T Barnett; Thomas J Stohlgren; Catherine S Jarnevich; Geneva W Chong; Jenny A Ericson; Tracy R Davern; Sara E Simonson
Journal:  Environ Monit Assess       Date:  2007-02-06       Impact factor: 2.513

Review 5.  Ensemble forecasting of species distributions.

Authors:  Miguel B Araújo; Mark New
Journal:  Trends Ecol Evol       Date:  2006-09-29       Impact factor: 17.712

6.  Risk analysis for biological hazards: what we need to know about invasive species.

Authors:  Thomas J Stohlgren; John L Schnase
Journal:  Risk Anal       Date:  2006-02       Impact factor: 4.000

7.  Boosted trees for ecological modeling and prediction.

Authors:  Glenn De'ath
Journal:  Ecology       Date:  2007-01       Impact factor: 5.499

8.  A working guide to boosted regression trees.

Authors:  J Elith; J R Leathwick; T Hastie
Journal:  J Anim Ecol       Date:  2008-04-08       Impact factor: 5.091

9.  Abundance and the environmental niche: environmental suitability estimated from niche models predicts the upper limit of local abundance.

Authors:  Jeremy VanDerWal; Luke P Shoo; Christopher N Johnson; Stephen E Williams
Journal:  Am Nat       Date:  2009-08       Impact factor: 3.926

Review 10.  Niches, models, and climate change: assessing the assumptions and uncertainties.

Authors:  John A Wiens; Diana Stralberg; Dennis Jongsomjit; Christine A Howell; Mark A Snyder
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-12       Impact factor: 11.205

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  1 in total

1.  Beyond a climate-centric view of plant distribution: edaphic variables add value to distribution models.

Authors:  Frieda Beauregard; Sylvie de Blois
Journal:  PLoS One       Date:  2014-03-21       Impact factor: 3.240

  1 in total

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