Literature DB >> 21901597

Producing reverse phase protein microarrays from formalin-fixed tissues.

Claudia Wolff1, Christina Schott, Katharina Malinowsky, Daniela Berg, Karl-Friedrich Becker.   

Abstract

In most hospitals around the world FFPE (formalin fixed, paraffin embedded) tissues have been used for diagnosis and have subsequently been archived since decades. This has lead to a sizeable pool of this kind of tissues. Till quite recently it was not possible to use this congeries of samples for protein analysis, but now several groups described successful protein extraction from FFPE tissues. In this chapter, we describe a protein extraction protocol established in our laboratory combined with the use of reverse phase protein microarray.

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Year:  2011        PMID: 21901597     DOI: 10.1007/978-1-61779-286-1_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

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Journal:  Pathologe       Date:  2017-11       Impact factor: 1.011

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Journal:  Nat Cell Biol       Date:  2013-01       Impact factor: 28.824

Review 3.  Toward deciphering proteomes of formalin-fixed paraffin-embedded (FFPE) tissues.

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Journal:  Proteomics       Date:  2012-04       Impact factor: 3.984

4.  A specific expression profile of heat-shock proteins and glucose-regulated proteins is associated with response to neoadjuvant chemotherapy in oesophageal adenocarcinomas.

Authors:  J Slotta-Huspenina; C Wolff; E Drecoll; M Feith; M Bettstetter; K Malinowsky; L Bauer; K Becker; K Ott; H Höfler; K-F Becker; R Langer
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6.  Variation in cell signaling protein expression may introduce sampling bias in primary epithelial ovarian cancer.

Authors:  Gabriele Mittermeyer; Katharina Malinowsky; Christian Beese; Heinz Höfler; Barbara Schmalfeldt; Karl-Friedrich Becker; Stefanie Avril
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Review 7.  Analysis of Reverse Phase Protein Array Data: From Experimental Design towards Targeted Biomarker Discovery.

Authors:  Astrid Wachter; Stephan Bernhardt; Tim Beissbarth; Ulrike Korf
Journal:  Microarrays (Basel)       Date:  2015-11-03

8.  Common protein biomarkers assessed by reverse phase protein arrays show considerable intratumoral heterogeneity in breast cancer tissues.

Authors:  Katharina Malinowsky; Mithu Raychaudhuri; Theresa Buchner; Sabrina Thulke; Claudia Wolff; Heinz Höfler; Karl-Friedrich Becker; Stefanie Avril
Journal:  PLoS One       Date:  2012-07-05       Impact factor: 3.240

9.  Evidence of prognostic relevant expression profiles of heat-shock proteins and glucose-regulated proteins in oesophageal adenocarcinomas.

Authors:  Julia Slotta-Huspenina; Daniela Berg; Karina Bauer; Claudia Wolff; Katharina Malinowsky; Lukas Bauer; Enken Drecoll; Marcus Bettstetter; Marcus Feith; Axel Walch; Heinz Höfler; Karl-Friedrich Becker; Rupert Langer
Journal:  PLoS One       Date:  2012-07-24       Impact factor: 3.240

  9 in total

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