Literature DB >> 21896716

A unifying approach for food webs, phylogeny, social networks, and statistics.

Grace S Chiu1, Anton H Westveld.   

Abstract

A food web consists of nodes, each consisting of one or more species. The role of each node as predator or prey determines the trophic relations that weave the web. Much effort in trophic food web research is given to understand the connectivity structure, or the nature and degree of dependence among nodes. Social network analysis (SNA) techniques--quantitative methods commonly used in the social sciences to understand network relational structure--have been used for this purpose, although postanalysis effort or biological theory is still required to determine what natural factors contribute to the feeding behavior. Thus, a conventional SNA alone provides limited insight into trophic structure. Here we show that by using novel statistical modeling methodologies to express network links as the random response of within- and internode characteristics (predictors), we gain a much deeper understanding of food web structure and its contributing factors through a unified statistical SNA. We do so for eight empirical food webs: Phylogeny is shown to have nontrivial influence on trophic relations in many webs, and for each web trophic clustering based on feeding activity and on feeding preference can differ substantially. These and other conclusions about network features are purely empirical, based entirely on observed network attributes while accounting for biological information built directly into the model. Thus, statistical SNA techniques, through statistical inference for feeding activity and preference, provide an alternative perspective of trophic clustering to yield comprehensive insight into food web structure.

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Year:  2011        PMID: 21896716      PMCID: PMC3179048          DOI: 10.1073/pnas.1015359108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  4 in total

1.  Compartments revealed in food-web structure.

Authors:  Ann E Krause; Kenneth A Frank; Doran M Mason; Robert E Ulanowicz; William W Taylor
Journal:  Nature       Date:  2003-11-20       Impact factor: 49.962

2.  Ecological community description using the food web, species abundance, and body size.

Authors:  Joel E Cohen; Tomas Jonsson; Stephen R Carpenter
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-23       Impact factor: 11.205

3.  Community structure in time-dependent, multiscale, and multiplex networks.

Authors:  Peter J Mucha; Thomas Richardson; Kevin Macon; Mason A Porter; Jukka-Pekka Onnela
Journal:  Science       Date:  2010-05-14       Impact factor: 47.728

4.  The trophic fingerprint of marine fisheries.

Authors:  Trevor A Branch; Reg Watson; Elizabeth A Fulton; Simon Jennings; Carey R McGilliard; Grace T Pablico; Daniel Ricard; Sean R Tracey
Journal:  Nature       Date:  2010-11-18       Impact factor: 49.962

  4 in total
  3 in total

1.  Social network models predict movement and connectivity in ecological landscapes.

Authors:  Robert J Fletcher; Miguel A Acevedo; Brian E Reichert; Kyle E Pias; Wiley M Kitchens
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-14       Impact factor: 11.205

2.  Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses.

Authors:  Bonnie L Hurwitz; Anton H Westveld; Jennifer R Brum; Matthew B Sullivan
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-07       Impact factor: 11.205

3.  Influences of Host Community Characteristics on Borrelia burgdorferi Infection Prevalence in Blacklegged Ticks.

Authors:  Holly B Vuong; Grace S Chiu; Peter E Smouse; Dina M Fonseca; Dustin Brisson; Peter J Morin; Richard S Ostfeld
Journal:  PLoS One       Date:  2017-01-17       Impact factor: 3.240

  3 in total

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