Literature DB >> 21893739

Interoperability driven integration of biomedical data sources.

Douglas Teodoro1, Rémy Choquet, Daniel Schober, Giovanni Mels, Emilie Pasche, Patrick Ruch, Christian Lovis.   

Abstract

In this paper, we introduce a data integration methodology that promotes technical, syntactic and semantic interoperability for operational healthcare data sources. ETL processes provide access to different operational databases at the technical level. Furthermore, data instances have they syntax aligned according to biomedical terminologies using natural language processing. Finally, semantic web technologies are used to ensure common meaning and to provide ubiquitous access to the data. The system's performance and solvability assessments were carried out using clinical questions against seven healthcare institutions distributed across Europe. The architecture managed to provide interoperability within the limited heterogeneous grid of hospitals. Preliminary scalability result tests are provided.

Mesh:

Year:  2011        PMID: 21893739

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  5 in total

1.  Building a transnational biosurveillance network using semantic web technologies: requirements, design, and preliminary evaluation.

Authors:  Douglas Teodoro; Emilie Pasche; Julien Gobeill; Stéphane Emonet; Patrick Ruch; Christian Lovis
Journal:  J Med Internet Res       Date:  2012-05-29       Impact factor: 5.428

2.  ORBDA: An openEHR benchmark dataset for performance assessment of electronic health record servers.

Authors:  Douglas Teodoro; Erik Sundvall; Mario João Junior; Patrick Ruch; Sergio Miranda Freire
Journal:  PLoS One       Date:  2018-01-02       Impact factor: 3.240

3.  The challenges in data integration - heterogeneity and complexity in clinical trials and patient registries of Systemic Lupus Erythematosus.

Authors:  Helen Le Sueur; Ian N Bruce; Nophar Geifman
Journal:  BMC Med Res Methodol       Date:  2020-06-24       Impact factor: 4.615

4.  Empirical mode decomposition and k-nearest embedding vectors for timely analyses of antibiotic resistance trends.

Authors:  Douglas Teodoro; Christian Lovis
Journal:  PLoS One       Date:  2013-04-25       Impact factor: 3.240

5.  Assisted knowledge discovery for the maintenance of clinical guidelines.

Authors:  Emilie Pasche; Patrick Ruch; Douglas Teodoro; Angela Huttner; Stephan Harbarth; Julien Gobeill; Rolf Wipfli; Christian Lovis
Journal:  PLoS One       Date:  2013-04-30       Impact factor: 3.240

  5 in total

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