Literature DB >> 21893290

Crystal structure of cGMP-dependent protein kinase reveals novel site of interchain communication.

Brent W Osborne1, Jian Wu, Caitlin J McFarland, Christian K Nickl, Banumathi Sankaran, Darren E Casteel, Virgil L Woods, Alexandr P Kornev, Susan S Taylor, Wolfgang R Dostmann.   

Abstract

The cGMP-dependent protein kinase (PKG) serves as an integral component of second messenger signaling in a number of biological contexts including cell differentiation, memory, and vasodilation. PKG is homodimeric and large conformational changes accompany cGMP binding. However, the structure of PKG and the molecular mechanisms associated with protomer communication following cGMP-induced activation remain unknown. Here, we report the 2.5 Å crystal structure of a regulatory domain construct (aa 78-355) containing both cGMP binding sites of PKG Iα. A distinct and segregated architecture with an extended central helix separates the two cGMP binding domains. Additionally, a previously uncharacterized helical domain (switch helix) promotes the formation of a hydrophobic interface between protomers. Mutational disruption of this interaction in full-length PKG implicates the switch helix as a critical site of dimer communication in PKG biology. These results offer new structural insight into the mechanism of allosteric PKG activation.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21893290      PMCID: PMC3168983          DOI: 10.1016/j.str.2011.06.012

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  52 in total

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Journal:  Eur J Biochem       Date:  1987-10-01

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Authors:  D B McKay; I T Weber; T A Steitz
Journal:  J Biol Chem       Date:  1982-08-25       Impact factor: 5.157

3.  One amino acid change produces a high affinity cGMP-binding site in cAMP-dependent protein kinase.

Authors:  J B Shabb; L Ng; J D Corbin
Journal:  J Biol Chem       Date:  1990-09-25       Impact factor: 5.157

4.  Isolated regulatory domains of cGMP-dependent protein kinase Ialpha and Ibeta retain dimerization and native cGMP-binding properties and undergo isoform-specific conformational changes.

Authors:  Robyn Richie-Jannetta; Jennifer L Busch; Kristin A Higgins; Jackie D Corbin; Sharron H Francis
Journal:  J Biol Chem       Date:  2006-01-09       Impact factor: 5.157

5.  Distinct interaction modes of an AKAP bound to two regulatory subunit isoforms of protein kinase A revealed by amide hydrogen/deuterium exchange.

Authors:  Lora L Burns-Hamuro; Yoshitomo Hamuro; Jack S Kim; Paul Sigala; Rosa Fayos; David D Stranz; Patricia A Jennings; Susan S Taylor; Virgil L Woods
Journal:  Protein Sci       Date:  2005-10-31       Impact factor: 6.725

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

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Authors:  W Landgraf; S Regulla; H E Meyer; F Hofmann
Journal:  J Biol Chem       Date:  1991-09-05       Impact factor: 5.157

8.  Role of the receptor in the mechanism of action of adenosine 3':5'-cyclic monophosphate.

Authors:  G N Gill; L D Garren
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

9.  Molecular cloning and predicted full-length amino acid sequence of the type I beta isozyme of cGMP-dependent protein kinase from human placenta. Tissue distribution and developmental changes in rat.

Authors:  M Sandberg; V Natarajan; I Ronander; D Kalderon; U Walter; S M Lohmann; T Jahnsen
Journal:  FEBS Lett       Date:  1989-09-25       Impact factor: 4.124

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  31 in total

1.  Synthetic Peptides as cGMP-Independent Activators of cGMP-Dependent Protein Kinase Iα.

Authors:  Thomas M Moon; Nathan R Tykocki; Jessica L Sheehe; Brent W Osborne; Werner Tegge; Joseph E Brayden; Wolfgang R Dostmann
Journal:  Chem Biol       Date:  2015-12-17

2.  The activity of cGMP-dependent protein kinase Iα is not directly regulated by oxidation-induced disulfide formation at cysteine 43.

Authors:  Hema Kalyanaraman; Shunhui Zhuang; Renate B Pilz; Darren E Casteel
Journal:  J Biol Chem       Date:  2017-03-30       Impact factor: 5.157

3.  Cyclic AMP-induced conformational changes in mycobacterial protein acetyltransferases.

Authors:  Subhalaxmi Nambi; Suguna Badireddy; Sandhya S Visweswariah; Ganesh S Anand
Journal:  J Biol Chem       Date:  2012-03-24       Impact factor: 5.157

Review 4.  Structural and mechanistic insights into the bifunctional enzyme isocitrate dehydrogenase kinase/phosphatase AceK.

Authors:  Jimin Zheng; Susan P Yates; Zongchao Jia
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-09-19       Impact factor: 6.237

Review 5.  The switch helix: a putative combinatorial relay for interprotomer communication in cGMP-dependent protein kinase.

Authors:  Thomas M Moon; Brent W Osborne; Wolfgang R Dostmann
Journal:  Biochim Biophys Acta       Date:  2013-02-13

6.  Neutron Crystallography Detects Differences in Protein Dynamics: Structure of the PKG II Cyclic Nucleotide Binding Domain in Complex with an Activator.

Authors:  Oksana Gerlits; James C Campbell; Matthew P Blakeley; Choel Kim; Andrey Kovalevsky
Journal:  Biochemistry       Date:  2018-03-13       Impact factor: 3.162

7.  An N-terminally truncated form of cyclic GMP-dependent protein kinase Iα (PKG Iα) is monomeric and autoinhibited and provides a model for activation.

Authors:  Thomas M Moon; Jessica L Sheehe; Praveena Nukareddy; Lydia W Nausch; Jessica Wohlfahrt; Dwight E Matthews; Donald K Blumenthal; Wolfgang R Dostmann
Journal:  J Biol Chem       Date:  2018-03-30       Impact factor: 5.157

Review 8.  Targeting the 26S Proteasome To Protect Against Proteotoxic Diseases.

Authors:  Natura Myeku; Karen E Duff
Journal:  Trends Mol Med       Date:  2017-12-09       Impact factor: 11.951

9.  Nitration of tyrosine 247 inhibits protein kinase G-1α activity by attenuating cyclic guanosine monophosphate binding.

Authors:  Saurabh Aggarwal; Christine M Gross; Ruslan Rafikov; Sanjiv Kumar; Jeffrey R Fineman; Britta Ludewig; Danny Jonigk; Stephen M Black
Journal:  J Biol Chem       Date:  2014-01-27       Impact factor: 5.157

10.  Structural basis for cyclic-nucleotide selectivity and cGMP-selective activation of PKG I.

Authors:  Gilbert Y Huang; Jeong Joo Kim; Albert S Reger; Robin Lorenz; Eui-Whan Moon; Chi Zhao; Darren E Casteel; Daniela Bertinetti; Bryan Vanschouwen; Rajeevan Selvaratnam; James W Pflugrath; Banumathi Sankaran; Giuseppe Melacini; Friedrich W Herberg; Choel Kim
Journal:  Structure       Date:  2013-11-14       Impact factor: 5.006

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