Literature DB >> 21889892

Essence of life: essential genes of minimal genomes.

Mario Juhas1, Leo Eberl, John I Glass.   

Abstract

Essential genes are absolutely required for cell survival. Determination of the universal minimal set of genes needed to sustain life is, therefore, expected to contribute greatly to our understanding of life at its simplest level, with applications in medicine and synthetic biology. The search for the minimal genome has led to the identification of often variable gene sets. We argue here that, based on the outcome of these analyses, it is becoming increasingly evident that some genes, and the functions encoded by them, are absolutely necessary for the survival of any living entity, whereas others can be omitted. We also examine ways of determining the minimal genome and discuss possible practical applications of a minimal cell.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2011        PMID: 21889892     DOI: 10.1016/j.tcb.2011.07.005

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  55 in total

1.  The essential gene set of a photosynthetic organism.

Authors:  Benjamin E Rubin; Kelly M Wetmore; Morgan N Price; Spencer Diamond; Ryan K Shultzaberger; Laura C Lowe; Genevieve Curtin; Adam P Arkin; Adam Deutschbauer; Susan S Golden
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-27       Impact factor: 11.205

2.  Functional genomics of Lactobacillus casei establishment in the gut.

Authors:  Hélène Licandro-Seraut; Hélène Scornec; Thierry Pédron; Jean-François Cavin; Philippe J Sansonetti
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-14       Impact factor: 11.205

3.  Multifunctional enzymes from reduced genomes - model proteins for simple primordial metabolism?

Authors:  Burckhard Seelig
Journal:  Mol Microbiol       Date:  2017-07-14       Impact factor: 3.501

4.  Genome-scale analysis of gene function in the hydrogenotrophic methanogenic archaeon Methanococcus maripaludis.

Authors:  Felipe Sarmiento; Jan Mrázek; William B Whitman
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-04       Impact factor: 11.205

5.  Insights into archaeal chaperone machinery: a network-based approach.

Authors:  Shikha Rani; Ankush Sharma; Manisha Goel
Journal:  Cell Stress Chaperones       Date:  2018-09-03       Impact factor: 3.667

6.  Uncovering major genomic features of essential genes in Bacteria and a methanogenic Archaea.

Authors:  Ana Laura Grazziotin; Newton Medeiros Vidal; Thiago Motta Venancio
Journal:  FEBS J       Date:  2015-07-14       Impact factor: 5.542

7.  Essential genome of Pseudomonas aeruginosa in cystic fibrosis sputum.

Authors:  Keith H Turner; Aimee K Wessel; Gregory C Palmer; Justine L Murray; Marvin Whiteley
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-16       Impact factor: 11.205

8.  Characterization of the Survival Influential Genes in Carcinogenesis.

Authors:  Divya Sahu; Yu-Lin Chang; Yin-Chen Lin; Chen-Ching Lin
Journal:  Int J Mol Sci       Date:  2021-04-22       Impact factor: 5.923

9.  Cross-Predicting Essential Genes between Two Model Eukaryotic Species Using Machine Learning.

Authors:  Tulio L Campos; Pasi K Korhonen; Neil D Young
Journal:  Int J Mol Sci       Date:  2021-05-11       Impact factor: 5.923

10.  Combining functional and structural genomics to sample the essential Burkholderia structome.

Authors:  Loren Baugh; Larry A Gallagher; Rapatbhorn Patrapuvich; Matthew C Clifton; Anna S Gardberg; Thomas E Edwards; Brianna Armour; Darren W Begley; Shellie H Dieterich; David M Dranow; Jan Abendroth; James W Fairman; David Fox; Bart L Staker; Isabelle Phan; Angela Gillespie; Ryan Choi; Steve Nakazawa-Hewitt; Mary Trang Nguyen; Alberto Napuli; Lynn Barrett; Garry W Buchko; Robin Stacy; Peter J Myler; Lance J Stewart; Colin Manoil; Wesley C Van Voorhis
Journal:  PLoS One       Date:  2013-01-31       Impact factor: 3.240

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