Literature DB >> 21880963

Rapid identification and validation of specific molecular targets for detection of Escherichia coli O104:H4 outbreak strain by use of high-throughput sequencing data from nine genomes.

Chi-Chun Ho1, Kwok-Yung Yuen, Susanna K P Lau, Patrick C Y Woo.   

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Year:  2011        PMID： 21880963      PMCID： PMC3187292          DOI： 10.1128/JCM.05062-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


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  5 in total

1.  Molecular profiling and phenotype analysis of Escherichia coli O26:H11 and O26:NM: secular and geographic consistency of enterohemorrhagic and enteropathogenic isolates.

Authors:  Martina Bielaszewska; Wenlan Zhang; Phillip I Tarr; Anne-Katharina Sonntag; Helge Karch
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

2.  Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study.

Authors:  Martina Bielaszewska; Alexander Mellmann; Wenlan Zhang; Robin Köck; Angelika Fruth; Andreas Bauwens; Georg Peters; Helge Karch
Journal:  Lancet Infect Dis       Date:  2011-06-22       Impact factor: 25.071

3.  Novel pan-genomic analysis approach in target selection for multiplex PCR identification and detection of Burkholderia pseudomallei, Burkholderia thailandensis, and Burkholderia cepacia complex species: a proof-of-concept study.

Authors:  Chi-Chun Ho; Candy C Y Lau; Paolo Martelli; San-Yuen Chan; Cindy W S Tse; Alan K L Wu; Kwok-Yung Yuen; Susanna K P Lau; Patrick C Y Woo
Journal:  J Clin Microbiol       Date:  2010-12-22       Impact factor: 5.948

4.  Phenotypic and molecular analysis of tellurite resistance among enterohemorrhagic Escherichia coli O157:H7 and sorbitol-fermenting O157:NM clinical isolates.

Authors:  Martina Bielaszewska; Phillip I Tarr; Helge Karch; Wenlan Zhang; Werner Mathys
Journal:  J Clin Microbiol       Date:  2005-01       Impact factor: 5.948

5.  Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC).

Authors:  Elzbieta Brzuszkiewicz; Andrea Thürmer; Jörg Schuldes; Andreas Leimbach; Heiko Liesegang; Frauke-Dorothee Meyer; Jürgen Boelter; Heiko Petersen; Gerhard Gottschalk; Rolf Daniel
Journal:  Arch Microbiol       Date:  2011-06-29       Impact factor: 2.552
  5 in total
  12 in total

1.  The resistome of Pseudomonas aeruginosa in relationship to phenotypic susceptibility.

Authors:  Veronica N Kos; Maxime Déraspe; Robert E McLaughlin; James D Whiteaker; Paul H Roy; Richard A Alm; Jacques Corbeil; Humphrey Gardner
Journal:  Antimicrob Agents Chemother       Date:  2014-11-03       Impact factor: 5.191

2.  Automated pangenomic analysis in target selection for PCR detection and identification of bacteria by use of ssGeneFinder Webserver and its application to Salmonella enterica serovar Typhi.

Authors:  Chi-Chun Ho; Alan K L Wu; Cindy W S Tse; Kwok-Yung Yuen; Susanna K P Lau; Patrick C Y Woo
Journal:  J Clin Microbiol       Date:  2012-03-21       Impact factor: 5.948

Review 3.  Shiga toxin-producing Escherichia coli O104:H4: a new challenge for microbiology.

Authors:  Maite Muniesa; Jens A Hammerl; Stefan Hertwig; Bernd Appel; Harald Brüssow
Journal:  Appl Environ Microbiol       Date:  2012-04-13       Impact factor: 4.792

Review 4.  Omics approaches in food safety: fulfilling the promise?

Authors:  Teresa M Bergholz; Andrea I Moreno Switt; Martin Wiedmann
Journal:  Trends Microbiol       Date:  2014-02-23       Impact factor: 17.079

5.  An efficient alternative marker for specific identification of Mycobacterium tuberculosis.

Authors:  Jianing Zhao; Yiwei Wang; Dairong Li; Jiawen Liu; Xuemei Zhang; Yujuan He; Hong Wang; Ju Cao; Yibing Yin; Wenchun Xu
Journal:  World J Microbiol Biotechnol       Date:  2014-03-25       Impact factor: 3.312

6.  Alignment-free design of highly discriminatory diagnostic primer sets for Escherichia coli O104:H4 outbreak strains.

Authors:  Leighton Pritchard; Nicola J Holden; Martina Bielaszewska; Helge Karch; Ian K Toth
Journal:  PLoS One       Date:  2012-04-05       Impact factor: 3.240

7.  Mobile effector proteins on phage genomes.

Authors:  E Fidelma Boyd; Megan R Carpenter; Nityananda Chowdhury
Journal:  Bacteriophage       Date:  2012-07-01

Review 8.  Whole-genome sequencing targets drug-resistant bacterial infections.

Authors:  N V Punina; N M Makridakis; M A Remnev; A F Topunov
Journal:  Hum Genomics       Date:  2015-08-05       Impact factor: 4.639

9.  Repertoire of novel sequence signatures for the detection of Candidatus Liberibacter asiaticus by quantitative real-time PCR.

Authors:  Sunitha Kogenaru; Qing Yan; Nadia Riera; M Caroline Roper; Xiaoling Deng; Timothy A Ebert; Michael Rogers; Michael E Irey; Gerhard Pietersen; Charles M Rush; Nian Wang
Journal:  BMC Microbiol       Date:  2014-02-17       Impact factor: 3.605

Review 10.  Romance of the three domains: how cladistics transformed the classification of cellular organisms.

Authors:  Chi-Chun Ho; Susanna K P Lau; Patrick C Y Woo
Journal:  Protein Cell       Date:  2013-07-19       Impact factor: 14.870
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